Factsheet for Solyc06g072100.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	85.59	93.29
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	81.96	88.79
Solyc03g019760.2.1	Tomato	nucleus	75.94	76.48
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	69.65	71.86
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	66.01	70.76
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	68.11	68.02
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	67.69	67.6
Os04t0528300-01	Rice	plasma membrane	66.43	66.81
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	66.71	66.81
Os10t0494300-01	Rice	extracellular, plasma membrane	67.27	66.53
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	65.87	66.34
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	66.71	66.16
TraesCSU01G020100.1	Wheat	plasma membrane	65.45	65.36
TraesCS2A01G374100.1	Wheat	plasma membrane	65.31	65.04
TraesCS1A01G164500.1	Wheat	cytosol	61.12	63.7
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	64.9	63.04
HORVU2Hr1G090960.2	Barley	cytosol	65.17	61.64
OQU82009	Sorghum	mitochondrion	66.15	60.64
TraesCS2D01G370400.2	Wheat	plastid	65.31	60.18
Solyc01g105400.2.1	Tomato	cytosol, plastid	9.37	57.27
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	57.34	56.94
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.49	52.93
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	38.46	51.89
Solyc01g105450.2.1	Tomato	plasma membrane	43.5	49.6
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	44.9	49.46
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	46.71	48.55
Solyc11g069710.1.1	Tomato	plastid	32.45	32.09
Solyc06g074970.1.1	Tomato	plastid	26.43	31.4
Solyc04g025170.2.1	Tomato	mitochondrion	21.96	15.39
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	22.52	14.76
Solyc06g075020.2.1	Tomato	plasma membrane	22.24	14.53
Solyc11g069820.1.1	Tomato	plasma membrane	22.1	14.46

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015245
GO:GO:0015908	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	UniProt:K4C8T2	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SMART:SM00382	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc06g072100.1	EnsemblPlants:Solyc06g072100.1.1	TMHMM:TMhelix	UniParc:UPI0002765586	SEG:seg	:

Description

No Description!

Coordinates

chr6:-:44433192..44436971

Molecular Weight (calculated)

80600.8 Da

IEP (calculated)

8.612

GRAVY (calculated)

0.152

Length

715 amino acids

Sequence
(BLAST)

001: MTRNSSSSFS YVVTSSNDDV IMEIDEASEP QGHNGIVVSA HVAWKDVSVM VTLNNGDTRN ILEGLTGYAE PGTFTALMGP SGSGKSTLLD ALSGRLASNA
101: ILSGNILLNG RKAKLSFGTV AFVTQDDTLI GTLTVRETIH YSAQLRLPDR MPLSEKRTLV ESTIADMGLQ DCADTFIGNW HLRGISGGEK RRVSIALEIL
201: MRPRLLFLDE PTSGLDSASA FFVTQTLRCL SRDGRTVIAS IHQPSSEVFE LFDRLYLLSG GKTVYFGQAS EAHQARYLPY SRLSIILWII FVSRPYTFFI
301: MWKLELNLVF GLQFFAEAGF PCPSFRNPSD HFLRCSNSDF DKVKATLRDS IKFDQYNDDP LNKMTTVEAI RSLVDFYRRS QYCYLANEQV EEMSKVKGTV
401: LDSNGSQASF FMQSYILTKR SFVNMTRDFG YYWLRLVIYL VVSVCVGTIY FNVGTTYNSI QARGACAAFI FGFMTFMSIG GFPSFVEDMK VFQRERMNGH
501: YSIIAFVISN TLSAMPFLIL IATLSGTICY FMVRFHPGFS HYLFFVLALY ASITTVESLM MVIASVVPNF LMGIVIGAGI LGISMVVSGF FRLPHDIPKP
601: VWRYPVSYLT FDFWAIQGQY KNHLKGLIFD NQSPDLPKIT GEYALKETFQ IHVNRSKWVD LSVIFSMIII YRLIFFIMIK INEDVTPWLR GYIARRKMQQ
701: NGANQNKTMT QYALA

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.