Factsheet for GSMUA_Achr5P19820_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	86.51	83.26
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	83.36	78.87
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	81.86	77.23
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	81.71	77.2
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	80.66	76.53
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	81.11	76.52
Solyc03g019760.2.1	Tomato	nucleus	81.41	76.48
CDY19179	Canola	cytosol, peroxisome, plasma membrane	76.61	75.59
PGSC0003DMT400069344	Potato	plasma membrane	31.93	75.53
CDY26211	Canola	cytosol, peroxisome, plasma membrane	76.46	75.44
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	80.96	75.42
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	80.81	75.28
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.16	75.15
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	80.36	75.07
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	79.46	74.65
Os10t0494300-01	Rice	extracellular, plasma membrane	80.81	74.55
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	78.26	74.47
CDX96749	Canola	cytosol, peroxisome, plasma membrane	75.41	74.3
CDX83888	Canola	cytosol, peroxisome, plasma membrane	75.41	74.08
Os04t0528300-01	Rice	plasma membrane	78.26	73.42
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	79.16	73.23
TraesCSU01G020100.1	Wheat	plasma membrane	77.81	72.49
TraesCS2A01G374100.1	Wheat	plasma membrane	77.66	72.14
TraesCS1A01G164500.1	Wheat	cytosol	73.16	71.14
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	77.81	70.52
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	68.82	69.55
HORVU2Hr1G090960.2	Barley	cytosol	77.36	68.25
OQU82009	Sorghum	mitochondrion	79.16	67.69
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	66.12	67.23
TraesCS2D01G370400.2	Wheat	plastid	77.66	66.75
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.76	66.01
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	70.31	65.14
GSMUA_Achr4P00390_001	Banana	plasma membrane	49.18	52.99
GSMUA_Achr6P04180_001	Banana	plasma membrane	45.73	51.61
GSMUA_AchrUn_...	Banana	plasma membrane	45.88	51.52
GSMUA_Achr6P02130_001	Banana	mitochondrion	44.98	50.85
GSMUA_Achr10P...	Banana	plasma membrane	31.78	50.72
GSMUA_AchrUn_...	Banana	plasma membrane	41.83	47.61
GSMUA_Achr3P20410_001	Banana	plasma membrane	42.43	45.79
GSMUA_Achr4P00380_001	Banana	plastid	49.48	39.81
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	32.68	29.86
GSMUA_Achr8P14250_001	Banana	plasma membrane	22.64	14.97
GSMUA_Achr11P...	Banana	plasma membrane	22.49	14.93
GSMUA_Achr4P12050_001	Banana	mitochondrion, plasma membrane	23.54	14.91
GSMUA_Achr4P05530_001	Banana	plasma membrane	22.34	14.83

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr5G19820_001	EnsemblPlants:GSMUA_Achr5P19820_001
EnsemblPlants:GSMUA_Achr5T19820_001	InterPro:IPR003439	UniProt:M0T011	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0002957E3A	SEG:seg	:	:	:	:

Description

ABC transporter G family member 11 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19820_001]

Coordinates

chr5:-:21436844..21441302

Molecular Weight (calculated)

74993.3 Da

IEP (calculated)

9.052

GRAVY (calculated)

0.102

Length

667 amino acids

Sequence
(BLAST)

001: MEDMEANMPS GNGIVVGGLS PLSETLWRDK TCTEFMGDVS ARLTWKDLTV TVTLGKGETH KSTLLDALAG RLATNAFLSG AILINGRKTK LSFGAAAYVT
101: QDDNLIGTLT VRETIWYSAR LRLPDKMPRE EKRALVESTI MEMGLQDCAD TVIGNWHLRG VSGGEKRRVS IALEILMRPR LLFLDEPTSG LDSASAFFVT
201: QTLRGLSRDG RTVIASIHQP SSEVFELFDS LYLLSGGRTV YFGQASEACQ FFAQAGFPCP SLRNPSDHFL RCVNSDFDKV KATLKGSVKL RFERSDDPLE
301: RTTTAEAMRR LIEFYSRSQY SYAARQKVDE ISRIKGTVLD SGGSQASFLM QALTLTRRSF VNMSRDFGYY WLRLLIYIVV TICIGTIYLN VGTGYSAILA
401: RGACASFVFG FVTFMSIGGF PSFVEDMKVF QRERLNGHYG VLAFVISNTL SAMPFLIMIS FASGTICYFM VKLHPGFMHY LFFVLCLYAS VTVVESLMMA
501: IASVVPNFLM GIIIGAGIQG IFMLVSGYFR LPNDIPKPFW RYPMTYISFD YWSLQGQYQN DLKGLLFDNQ TPDLPKIPGE YVLENVFQID VSRSKWWDLS
601: VLYSMVIIYR IIFFIMIKIN EDVTPWIRGY IARRRMQQKT SFDRTPSPTM AAASVGTRRC PPMRSQT

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.