Factsheet for TraesCS2A01G374100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G020100.1	Wheat	plasma membrane	99.3	99.58
Os04t0528300-01	Rice	plasma membrane	92.62	93.53
TraesCS2D01G370400.2	Wheat	plastid	98.89	91.49
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	91.23	90.85
HORVU2Hr1G090960.2	Barley	cytosol	95.26	90.48
OQU82009	Sorghum	mitochondrion	91.78	84.49
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	75.49	78.21
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	72.14	77.66
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.63	77.02
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	74.65	75.92
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	74.51	75.67
Solyc03g019760.2.1	Tomato	nucleus	74.09	74.93
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	73.4	74.54
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	72.84	74.4
CDY19179	Canola	cytosol, peroxisome, plasma membrane	69.78	74.11
CDY26211	Canola	cytosol, peroxisome, plasma membrane	69.5	73.82
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.87	73.61
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.22	73.52
CDX83888	Canola	cytosol, peroxisome, plasma membrane	69.36	73.34
CDX96749	Canola	cytosol, peroxisome, plasma membrane	69.08	73.26
PGSC0003DMT400069344	Potato	plasma membrane	28.13	71.63
TraesCS1A01G164500.1	Wheat	cytosol	66.99	70.12
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	64.07	69.7
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	60.86	66.62
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.04	65.31
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	49.16	51.23
TraesCS5A01G249900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	45.26	44.34
TraesCS7A01G566200.1	Wheat	plasma membrane, plastid	41.5	43.13
TraesCS2A01G110200.1	Wheat	plastid	40.25	43.07
TraesCS4A01G308200.1	Wheat	plastid	41.09	42.2
TraesCS6A01G140300.2	Wheat	plastid	41.36	41.89
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	32.59	32.19
TraesCS1A01G141400.1	Wheat	mitochondrion, plasma membrane	21.87	16.83
TraesCS2A01G049700.2	Wheat	plasma membrane	23.4	15.56
TraesCS6A01G395000.2	Wheat	plasma membrane, plastid	23.4	13.49

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G374100	EnsemblPlants:TraesCS2A01G374100.1	TIGR:cd03213
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:617180332..617185160

Molecular Weight (calculated)

79091.6 Da

IEP (calculated)

9.130

GRAVY (calculated)

0.190

Length

718 amino acids

Sequence
(BLAST)

001: MRGGGGGGED TRRTAAGQAM VELQANGATA TATSASGAMV VGLSPLSETL WRDSKAMPGA GAAALIGEVS ARLTWKDLSV TVALGPGKTQ TVLDELTGFA
101: EPGSLTALMG PSGSGKSTLL DALAGRLAAN AFLSGSVLLN GRKAKLSFGA AAYVTQDDNL IGTLTVRETI GYSALLRLPD KMPRDDKRAL VEGTIVEMGL
201: QDCADTVIGN WHLRGVSGGE KRRVSIALEL LMRPRLLFLD EPTSGLDSSS AFFVTQTLRG LARDGRTVIA SIHQPSSEVF ELFDMLFLLS GGKNVYFGQA
301: AQACEFFAEV GFPCPPLRNP SDHFLRCVNS DFDKVKATLK GSMKARIERS DDPLDKITTS EAIRKLVSAY NRSQYYYAAR EKVNDIARIK GTVMDSRGSQ
401: ASFLMQACTL TRRSFINMSR DFGYYWLRLL IYLLVTVCIG TIYLDVGTKY TSILARAACA AFVFGFVTFM SIGGFPSFVE EMKVFQRERL NGHYGVAAFV
501: IANTISALPF LVLICFMSGT VCYFMVRLHP GFTHYIFFVL NLYASVTVVE SLMMAIASVI PNFLMGIIIG AGIQGIFMLV SGYFRLPYDI PKIFWRYPMQ
601: YISFHYWALQ GQCQNDMDGL LFDNQYPDQP KIPGDFILKY IFQINVHRSK WIDLSVIFSM IFIYRLLFFI MIKVNEDVMP WIRGYIARKR LQKKVPAIGK
701: TPSLRGYVVD PELGPNEG

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.