Factsheet for TraesCS2A01G110200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G110700.1	Wheat	plastid	95.83	95.83
TraesCS2B01G128400.1	Wheat	plastid	96.13	95.41
HORVU2Hr1G019010.2	Barley	plasma membrane	57.38	91.89
HORVU2Hr1G018920.1	Barley	cytosol	57.08	74.95
KXG34927	Sorghum	plastid	69.45	66.67
Os07t0288700-02	Rice	plastid	72.13	66.39
Zm00001d019398_P001	Maize	plastid	66.47	64.36
GSMUA_AchrUn_...	Banana	plasma membrane	53.5	60.44
GSMUA_Achr6P04180_001	Banana	plasma membrane	51.42	58.38
GSMUA_Achr10P...	Banana	plasma membrane	36.21	58.13
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	20.72	57.2
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.56	56.42
GSMUA_AchrUn_...	Banana	plasma membrane	47.84	54.78
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	52.01	54.11
TraesCS4A01G308200.1	Wheat	plastid	56.04	53.79
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	51.56	53.31
TraesCS6A01G140300.2	Wheat	plastid	56.18	53.17
TraesCS5A01G249900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.93	52.11
TraesCS7A01G566200.1	Wheat	plasma membrane, plastid	53.65	52.1
KRH42130	Soybean	plasma membrane	48.29	50.55
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	52.01	50.36
KRH42133	Soybean	extracellular	52.16	50.36
KRH18182	Soybean	cytosol	49.33	48.96
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	50.22	48.91
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.04	48.86
PGSC0003DMT400043270	Potato	cytosol	47.09	48.47
KRH42131	Soybean	cytosol, nucleus, plasma membrane	50.37	48.35
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	48.73	48.23
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	46.05	46.89
KRH42124	Soybean	cytosol	45.45	45.12
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	45.01	44.02
KRH42128	Soybean	plasma membrane	39.79	42.86
TraesCS2A01G374100.1	Wheat	plasma membrane	43.07	40.25
TraesCS1A01G164500.1	Wheat	cytosol	40.39	39.5
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	39.49	38.46
KRH18188	Soybean	cytosol	35.92	37.95
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	31.89	29.44
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	10.58	27.84
TraesCS1A01G141400.1	Wheat	mitochondrion, plasma membrane	21.91	15.76
TraesCS2A01G049700.2	Wheat	plasma membrane	22.65	14.07
TraesCS6A01G395000.2	Wheat	plasma membrane, plastid	24.29	13.09

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF260	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G110200	EnsemblPlants:TraesCS2A01G110200.1	TIGR:cd03213	:

Description

No Description!

Coordinates

chr2A:-:61808524..61819058

Molecular Weight (calculated)

73802.5 Da

IEP (calculated)

9.214

GRAVY (calculated)

0.237

Length

671 amino acids

Sequence
(BLAST)

001: MAASPLPRWA PTPSPTKPLR STTSSSTAMV SWRGWSAWPS SPIFFPRCLS DSEPPASGVV DNAKPGTTEV FLTWKDLSVT AMSGRKGRAV ILDGLSGYAR
101: PGEVLALMGP SGCGKTTLLD TLAGRLGPNM KESGDIMING CRQKIASRTS AYVTQEDVLM VTLTVAEAVH YSAELQLPDS LTRAEKRSWA DDVIKQMGLA
201: AVAGTRIGGR VSKGISGGQR KRVSICIELL ASPPLIFLDE PTSGLDSAAS YHVMSRIAGI AKRNGTTVVA AIHQPSTEVF ELFHGLCLLA NGKTVYFGPA
301: SKAMEFFDAN GFPCPLRMNP SDHFLRMINI DFEEFGEEST VNAPHAAKVI QTLVGSFGSV AILDTEMEGR QINQGDYVVQ QRQATFLTKL VVLTKRSMIN
401: MHRDIGYYWL RFGIYMALFL TIGTIFFNVG HNYSSIQARA SMLMYTSTFM TMMAIGAFPS FVEDMKVFEK ERRSRHYGVT EFVIANTLSS TVYLGLICVL
501: PAIIAYYLTG LQRGIGHFFF VATLWACTML VEGLMMIVAA IVPDFLMGII TGSGVQGLLM LNAGFFRLPN DLPKPIWKYP TYYISYHKYT TQGLYKNEFL
601: GLVFPNLAGV DGVITGQYIL KNNFQVELGY SKWVDLAILL GMVIIYRVIF LVIIKVFDVA KPMIKSFMIK V

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.