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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G019010.2 Barley plasma membrane 62.62 76.37
TraesCS2B01G128400.1 Wheat plastid 75.93 57.4
TraesCS2D01G110700.1 Wheat plastid 75.34 57.38
TraesCS2A01G110200.1 Wheat plastid 74.95 57.08
Solyc05g051530.2.1 Tomato cytosol, peroxisome, plasma membrane 48.14 46.42
GSMUA_Achr10P... Banana plasma membrane 37.57 45.93
GSMUA_AchrUn_... Banana plasma membrane 51.86 44.61
Os07t0288700-02 Rice plastid 63.01 44.17
KXG34927 Sorghum plastid 59.88 43.78
GSMUA_Achr6P04180_001 Banana plasma membrane 50.29 43.49
Zm00001d019398_P001 Maize plastid 57.14 42.14
GSMUA_AchrUn_... Banana plasma membrane 46.77 40.78
PGSC0003DMT400041814 Potato cytosol, peroxisome, plasma membrane 47.55 37.67
Solyc11g009100.1.1 Tomato cytosol, peroxisome, plasma membrane 46.18 36.36
PGSC0003DMT400043270 Potato cytosol 46.38 36.35
HORVU6Hr1G027440.10 Barley plastid 48.14 35.5
KRH18184 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 30.53 35.45
KRH42130 Soybean plasma membrane 43.64 34.79
KRH18202 Soybean cytosol, nucleus, plasma membrane, plastid 46.97 34.63
KRH42133 Soybean extracellular 46.58 34.24
KRH18189 Soybean cytosol, peroxisome, plasma membrane 45.4 33.67
HORVU5Hr1G070400.3 Barley cytosol, peroxisome 49.51 33.51
KRH18182 Soybean cytosol 43.84 33.14
VIT_00s0822g00010.t01 Wine grape cytosol, peroxisome, plasma membrane 15.66 32.92
KRH42131 Soybean cytosol, nucleus, plasma membrane 45.01 32.9
KRH42129 Soybean cytosol, peroxisome, plasma membrane 43.05 32.45
KRH18205 Soybean cytosol, peroxisome, plasma membrane 39.14 30.35
KRH42124 Soybean cytosol 39.92 30.18
KRH18181 Soybean cytosol, peroxisome, plasma membrane 39.73 29.59
KRH42128 Soybean plasma membrane 35.03 28.73
HORVU1Hr1G030200.1 Barley nucleus, peroxisome, plasma membrane 38.16 28.3
KRH18188 Soybean cytosol 33.46 26.93
HORVU2Hr1G090960.2 Barley cytosol 39.53 26.72
HORVU4Hr1G041540.11 Barley plastid 11.35 25.89
HORVU5Hr1G125010.1 Barley cytosol, peroxisome, plasma membrane, plastid 27.98 19.78
AT3G21080.1 Thale cress cytosol, peroxisome, plasma membrane 7.05 14.12
HORVU7Hr1G122580.37 Barley endoplasmic reticulum, vacuole 20.55 11.97
HORVU6Hr1G091510.2 Barley mitochondrion 21.14 10.34
HORVU1Hr1G037250.2 Barley plasma membrane 20.55 10.31
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:ABC_2_transInterPro:ABC_transporter-likencoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:HORVU2Hr1G018920EnsemblPlants:HORVU2Hr1G018920.1InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061PANTHER:PTHR19241PANTHER:PTHR19241:SF260SUPFAM:SSF52540TMHMM:TMhelix
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:-:48894702..48900515
Molecular Weight (calculated)
51419.5 Da
IEP (calculated)
7.806
GRAVY (calculated)
0.192
Length
511 amino acids
Sequence
(BLAST)
001: MVTLTVAEAV HYSAQLQLPD SLTPAEKRSW ADDVIKQMGL AAVAGTRIGG RVSKGISGGQ RKRVSICIEL LASPALIFLD EPTSGLDSAA SYHVMSRIAG
101: IAKRNGTTVV AAIHQPSTEV FELFHGLCLL ANGRTVYFGP ASKAMEFFDA NGFPCPLRMN PSDHFLRMIN LDFEEFEGES TVNAPHASKV IQTLVGSASP
201: VAILGPEMEA RQTNQGEYVL QQRQATFLTK SVVLTKRSMI NMHRDIGYYW LRFAINMGLF LTIGTIFFNV GHNYASIQAR ASMIMYTSTF MTMMAIGAFP
301: SFVEDMKIFE KERRSGHYGV TEFVIANTLS STIYLGLISV LPAAIAYYLT GLQRGICHFL FFVATLWACT MLVEGLMMIV AAIVPDFLLG IITGSGVQGL
401: LMLXXXXXXX XSQSQYGSTQ LITYPTTNIQ LKDCTKTNSL AWCFQIXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ETTDLFCSRV RPAGDSRPHS
501: RPAHTWSADG S
Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)
001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW
Arabidopsis Description
ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.