Factsheet for HORVU5Hr1G125010.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 1
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	95.71	95.58
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	95.16	94.64
EER90467	Sorghum	cytosol, plasma membrane, plastid	81.88	81.99
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	78.15	78.58
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	71.65	70.96
VIT_06s0061g00350.t01	Wine grape	plastid	67.77	67.87
KRG89865	Soybean	plastid	45.23	66.73
KRH22852	Soybean	cytosol, plastid	65.98	65.88
KRH26514	Soybean	plasma membrane, plastid	65.42	65.33
Solyc06g074970.1.1	Tomato	plastid	53.94	64.78
Solyc11g069710.1.1	Tomato	plastid	63.76	63.76
PGSC0003DMT400050589	Potato	plastid	63.35	63.35
AT2G28070.1	Thale cress	plastid	63.9	63.29
CDY30512	Canola	cytosol	35.82	62.71
Bra011981.1-P	Field mustard	plastid	63.49	62.7
CDX77150	Canola	plastid	62.79	62.19
PGSC0003DMT400031312	Potato	plastid	61.83	61.83
Bra034385.1-P	Field mustard	plastid	58.37	61.25
CDX71393	Canola	plastid	63.62	57.64
CDY04533	Canola	mitochondrion	63.62	56.37
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	79.94	53.62
HORVU2Hr1G019010.2	Barley	plasma membrane	18.67	32.22
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	33.47	32.05
HORVU2Hr1G090960.2	Barley	cytosol	32.78	31.35
HORVU6Hr1G027440.10	Barley	plastid	29.88	31.17
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	28.35	29.75
HORVU2Hr1G018920.1	Barley	cytosol	19.78	27.98
HORVU4Hr1G041540.11	Barley	plastid	8.16	26.34
HORVU7Hr1G122580.37	Barley	endoplasmic reticulum, vacuole	16.74	13.8
HORVU6Hr1G091510.2	Barley	mitochondrion	18.95	13.12
HORVU1Hr1G037250.2	Barley	plasma membrane	17.84	12.67

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:HORVU5Hr1G125010
EnsemblPlants:HORVU5Hr1G125010.1	InterPro:IPR003439	UniProt:M0YHK9	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0002965A5F	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:667714370..667720206

Molecular Weight (calculated)

79363.6 Da

IEP (calculated)

9.215

GRAVY (calculated)

0.258

Length

723 amino acids

Sequence
(BLAST)

001: MEAMSSDQYR SSSSSAGSPS APTTGGGGGR RYYFPRPGRP VSFEDSPDWG DDITVDAAGS SSSIHLASAS AASSAYPSPS PSPSLPGPSA SGSGFRERKV
101: AGAALVWKEL SVSVRGGRRP GRVVRGSSGY ALPGTLTVVM GPARSGKSTL LRAIAGRLRG AERMYGEVFV NGVKSPLPYG SYGYVDRDDV LIESLTVREM
201: LYYSALLQLP GVFSSKKSFV EDAIAAMSLG DYADKLIGGH CFTKRLPTGE RRRVSIAREL VMRPHVLFID EPLYHLDSVS ALLLMVTLKK LASTGCTVIF
301: TMYQSSTEVF GLFDRICLLS NGNTLFFGET LSCLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NLQDDQGDFS SVSMDTAVAI RTLEATYKSS
401: AESAAVESMI AKLIDKEGPC LKSKGRASDA ARIGILTWRS LLIMSRDWKY FWSRLVLYML LALSIGTIFI DIGHSLSSVV VRISAIFVFV SFLILLSVCG
501: VPAHIDEIKI YSHEDSNRHS GTLVFLLGHF LSSIPFLFLV SISSSLVFYF LIGLRNEFSF LMYFIITIFM CLLANEALMM IVAYMWLETY KCTLTLICLY
601: VIMMVVAGYF RIREAIPSPV WNYPLSYISF HTYAVQGLVE NEYVGTSFAV GATRTIPGVQ AVRGSYGISS STGAKWRNLL ILFLMAIGYR VVLYVLLRLD
701: VRRHVRFGKR PCWPSIHTSA APK

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.