Factsheet for Solyc11g069710.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050589	Potato	plastid	98.34	98.34
Solyc06g074970.1.1	Tomato	plastid	72.89	87.54
KRG89865	Soybean	plastid	58.23	85.92
VIT_06s0061g00350.t01	Wine grape	plastid	85.48	85.6
KRH26514	Soybean	plasma membrane, plastid	83.54	83.43
KRH22852	Soybean	cytosol, plastid	83.54	83.43
CDY30512	Canola	cytosol	46.61	81.6
AT2G28070.1	Thale cress	plastid	79.39	78.63
CDX77150	Canola	plastid	77.45	76.71
Bra011981.1-P	Field mustard	plastid	77.59	76.64
Bra034385.1-P	Field mustard	plastid	72.61	76.2
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	73.03	72.33
CDX71393	Canola	plastid	77.73	70.43
CDY04533	Canola	mitochondrion	78.01	69.12
EER90467	Sorghum	cytosol, plasma membrane, plastid	65.15	65.24
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	63.9	63.81
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	63.76	63.76
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	63.21	63.56
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	63.49	63.14
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	65.42	43.88
Solyc01g105400.2.1	Tomato	cytosol, plastid	7.05	43.59
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	27.39	37.36
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	32.23	35.9
Solyc01g105450.2.1	Tomato	plasma membrane	30.98	35.73
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	32.23	35.3
Solyc03g019760.2.1	Tomato	nucleus	33.61	34.23
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	31.54	33.43
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	32.09	32.45
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	29.74	31.25
Solyc11g069820.1.1	Tomato	plasma membrane	21.85	14.46
Solyc06g075020.2.1	Tomato	plasma membrane	21.72	14.35
Solyc04g025170.2.1	Tomato	mitochondrion	19.92	14.12
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	21.16	14.02

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	UniProt:K4DAC7
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF447
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g069710.1	EnsemblPlants:Solyc11g069710.1.1	TMHMM:TMhelix	UniParc:UPI00027693D3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:54310842..54319192

Molecular Weight (calculated)

80397.0 Da

IEP (calculated)

8.948

GRAVY (calculated)

0.231

Length

723 amino acids

Sequence
(BLAST)

001: MEEIQSQSDH YRSSSSSASS PASRVPSSNF FYLRKPGSLR QPISFEDSPD WEDTDIEVRV DEGGDSINAA TTPASPSLSK LNSGSLPSPP LPDGAVITRK
101: IAGASIAWKD LTVTIKGKRK YSDKVVKSSN GYALPGTMTV IMGPAKSGKS TLLRSLAGRL PDSARMYGEV FVNGTKRSMP YGSYGFVDRE TTLIGTLTVR
201: EFLYYSALLQ LPGFLCQKRS VVEDAIDSMS LGDYANKLIG GHCYMKGLRS GERRRVSIAR ELVMRPHILF IDEPLYRLDS VSALLMMVTL KKLASTGCTL
301: IFTIYQSSTE VFGLFDRICL LSNGNTLFFG ETLACLQHFS NAGFPCPIMQ SPSDHFLRAI NTEFDRIIAM CKSWQDDHGD LSAVNMDTAV AIRTLEATYK
401: SSADAVALET MIVKLTEKEG PSLKSKGMVG NLTRVAVLTW RSLLIMSREW KYYWLRLILY MLLALCIGTV FSGLGHTLSS VVTRVAAIFV FVSFTSLLSI
501: AGVPAQMKEI KIYACEESNQ HSGAFIFLLG QLFASIPFLF LISISSSLVF YFLVGLRDEF SMLMYFVLNF FACLLVNEGL VLAVTSIWQD IFWSVLIFVS
601: IQVIMMLSAG FLRIRSSLPG PVWMYPISYI AFHTYSIQGL LENEYNETSF AVGQVRTISG NQALQNVYDI SADSNSKWKN LLVLFLMAVA YRVLVFVLLK
701: FYVRKSLFVP KLFLCNQNTK NSR

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.