CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	81.99	81.88
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	81.3	81.08
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	81.44	80.88
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	78.12	78.44
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	71.19	70.41
VIT_06s0061g00350.t01	Wine grape	plastid	68.42	68.42
KRG89865	Soybean	plastid	45.98	67.76
KRH22852	Soybean	cytosol, plastid	66.48	66.3
KRH26514	Soybean	plasma membrane, plastid	65.93	65.75
Solyc06g074970.1.1	Tomato	plastid	54.57	65.45
CDY30512	Canola	cytosol	37.4	65.38
Solyc11g069710.1.1	Tomato	plastid	65.24	65.15
PGSC0003DMT400050589	Potato	plastid	64.82	64.73
AT2G28070.1	Thale cress	plastid	65.1	64.38
Bra011981.1-P	Field mustard	plastid	64.4	63.52
PGSC0003DMT400031312	Potato	plastid	63.16	63.07
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	93.91	62.89
CDX77150	Canola	plastid	63.43	62.74
Bra034385.1-P	Field mustard	plastid	59.28	62.12
CDX71393	Canola	plastid	64.54	58.4
CDY04533	Canola	mitochondrion	64.68	57.23
OQU84078	Sorghum	cytosol, plasma membrane	27.7	34.78
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	33.38	32.83
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	32.41	32.77
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	30.33	31.83
OQU82009	Sorghum	mitochondrion	32.96	30.51
KXG34927	Sorghum	plastid	29.22	30.19
KXG19944	Sorghum	plastid	29.5	29.26
OQU91719	Sorghum	plasma membrane	17.87	13.87
OQU76478	Sorghum	plasma membrane	7.06	13.42
KXG31382	Sorghum	plasma membrane	19.81	12.95
KXG25878	Sorghum	plasma membrane	18.56	12.23

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8059239	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
UniProt:C5WRV6	EnsemblPlants:EER90467	ProteinID:EER90467	ProteinID:EER90467.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382	EnsemblPlantsGene:SORBI_3001G003300
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001A82453	RefSeq:XP_002463469.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:290475..298496

Molecular Weight (calculated)

79922.4 Da

IEP (calculated)

8.645

GRAVY (calculated)

0.303

Length

722 amino acids

Sequence
(BLAST)

001: MEVAASSDQY RSSSSSASSP ARRYYLPKPG ALRRPISFED SPDWDDIHPD DTIHLASAAS ASISIASSAY PSPSPSLPPG PSSASTAACR ERKLAGATLV
101: WKDLTVSSLA ATTNRFSDRL VKSSNGYALP ATLTVIMGPA RSGKSTLLRA IAGRLSATER IYGEVFVNGA KSPLPYGSYG YVDRDDVLIE SLTVREMLYF
201: SALLQLPGFL SSKKSIVEDA IAAMSLCDHA DKLIGGNCFM KRLPTGERRR VSIARELVMR PHVLFIDEPL YNLDSVSALL LMVTLKKLAS TGCTIIFTMY
301: QSSTEVFGLF DRICLLSNGN TLFFGETLAC LQHFSNAGFP CPIMQSPSDH FLRAINTDFD RIIAMCKNLQ DDQGDFSSVS MDTAVAIRTL EATYKQSADS
401: IAVESMIAKL TEKEGPCLKG KGRASDAARI VVLTWRSLLI MSRDWKYFWI RLALYMLIAL SIGTVFTDIG HSLSSVMVRI SAIFAFVSFV ILLSASGVPA
501: HIDEVKIYSH EEANRHSGTM VFLLGNFLSS IPFLFLVSIL SSLVFYFLIG LRNEFSFLMY FVITIFVCLL ANEALMMIIA YIWLETYKCS LTLIFLYVIM
601: MLVAGYFRIR ENLPYPVWTY PLSFISFHTY AVQGLVENEY VGTSFAVGQI RTIPGVQAVR GSYDISSSTN AKWVNLLVLL LMAIGYRIVL YLLLRLDVRK
701: HARMLGNWRS WWPSVHSATG AK

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.