CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020811_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	93.05	92.8
Os09t0472100-01	Rice	plasma membrane	80.93	82.39
TraesCS5A01G249900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	81.74	81.86
TraesCS5B01G247800.1	Wheat	plasma membrane, plastid	81.47	81.58
TraesCS5B01G248000.1	Wheat	plasma membrane, plastid	81.06	81.51
TraesCS5D01G257000.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	80.93	81.04
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	80.79	80.9
TraesCS5D01G257100.2	Wheat	nucleus, peroxisome, plasma membrane, plastid	81.2	80.87
TraesCS5B01G247700.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	80.65	80.76
Os09t0472200-00	Rice	plasma membrane	77.38	79.33
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	80.11	77.88
GSMUA_AchrUn_...	Banana	plasma membrane	61.85	76.43
GSMUA_Achr10P...	Banana	plasma membrane	42.1	73.92
GSMUA_Achr6P04180_001	Banana	plasma membrane	58.72	72.93
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.43	70.78
GSMUA_AchrUn_...	Banana	plasma membrane	55.45	69.45
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	50.0	69.25
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	53.68	61.09
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	53.81	60.86
PGSC0003DMT400043270	Potato	cytosol	53.95	60.74
OQU84078	Sorghum	cytosol, plasma membrane	46.46	59.3
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	55.86	59.16
KRH42130	Soybean	plasma membrane	51.09	58.5
KRH42133	Soybean	extracellular	54.5	57.55
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	53.81	57.33
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	34.06	56.82
KRH18182	Soybean	cytosol	52.32	56.8
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	52.18	56.49
KRH42131	Soybean	cytosol, nucleus, plasma membrane	53.68	56.37
KXG34927	Sorghum	plastid	53.27	55.94
KXG19944	Sorghum	plastid	54.63	55.08
KRH42128	Soybean	plasma membrane	45.23	53.29
KRH42124	Soybean	cytosol	47.68	51.78
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	46.46	51.75
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	47.28	50.58
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	43.32	44.54
KRH18188	Soybean	cytosol	38.28	44.25
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	40.6	43.31
OQU82009	Sorghum	mitochondrion	44.41	41.79
EER90467	Sorghum	cytosol, plasma membrane, plastid	32.83	33.38
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	11.04	31.76
OQU76478	Sorghum	plasma membrane	10.08	19.47
OQU91719	Sorghum	plasma membrane	22.48	17.74
KXG31382	Sorghum	plasma membrane	23.84	15.85
KXG25878	Sorghum	plasma membrane	22.34	14.96

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1B6QD25	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	EnsemblPlants:KXG35822	ProteinID:KXG35822	ProteinID:KXG35822.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF301	SMART:SM00382
EnsemblPlantsGene:SORBI_3002G234400	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00081AC399	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:62554383..62559382

Molecular Weight (calculated)

79468.1 Da

IEP (calculated)

8.621

GRAVY (calculated)

0.074

Length

734 amino acids

Sequence
(BLAST)

001: MASGQQQQQH LPNVPRWTPS PPRRQQAHEE GGGGGDEVDA DGSAFGGSMR STDGSAFPFG SGRSFPFPLP QPSLEISVLQ AAANGTGGSG GVGVDGPVAR
101: EKSLRRTDEG VVISWEDLWV SAAGGKGGRV PILCGLNGYA RPGEVLAIMG PSGCGKSTLL DALAGRLGSN VSQKGDILIN GRRQKLAYGT SAYVTQDDVL
201: MTTLTVREAV HYSAQLQLPS AMAASAKRER AEETLREMGL EAAADTRIGG WMHKGISGGQ RRRVSICMEI LTRPALLFLD EPTSGLDSAA SYHVVGRIAR
301: LARREGMTVV AAVHQPSTEV YGLFHGLCLL AYGRTVFFGP AAETNQFFAL SGFPCPSLMN PSDHFLRTIN KDFDKDIEEG LNGEIKMTTA EAIDTLVNSY
401: KASAYMEKVT RQIADIRENG GAVVKKEWHT SFLTQSLVLT KRSFVNMYRD LGYYWLRFAI YIMLCLCVGT VFYDIGHSYG SILARGSLLN FVAAFLTFMA
501: IGGFPSFVED MKIFGRERLN GHYGASSFTI ANTVSAAPYL ALISVVPGAI AYYLVGLQSS FGHFAYFALV LFTTMMVVEG LMMIVASAVP DFLMGIITGA
601: GIQGVMMLNG GFFRLPNDLP KPVWRYPMYY VAFHKYANQG LYKNEFLGLT FPNNQAGGAA TVSGGQILTD FWQVEMGYSK WVDLGILCGM VVLYRVLFLA
701: IVKLTEKVKP MIKGFRFRNT APSVHVAEKG SGTP

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.