Factsheet for TraesCS5B01G248000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	nucleus, plasma membrane, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G247700.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	95.75	95.36
TraesCS5B01G247800.1	Wheat	plasma membrane, plastid	95.62	95.23
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	94.79	94.41
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	93.29	90.2
Os09t0472100-01	Rice	plasma membrane	80.55	81.55
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	81.51	81.06
Zm00001d020811_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	80.55	79.89
Os09t0472200-00	Rice	plasma membrane	77.4	78.91
GSMUA_AchrUn_...	Banana	plasma membrane	61.78	75.93
GSMUA_Achr10P...	Banana	plasma membrane	43.29	75.6
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.25	72.84
GSMUA_Achr6P04180_001	Banana	plasma membrane	58.77	72.59
GSMUA_AchrUn_...	Banana	plasma membrane	55.75	69.45
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	50.0	68.87
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	55.21	62.48
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	55.21	62.1
PGSC0003DMT400043270	Potato	cytosol	54.11	60.58
TraesCS2B01G128800.1	Wheat	plasma membrane	39.18	60.08
TraesCS7B01G490800.1	Wheat	peroxisome	47.81	59.66
KRH42130	Soybean	plasma membrane	51.37	58.5
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	55.48	58.44
TraesCS7B01G490700.1	Wheat	plastid	34.52	57.67
TraesCS2B01G128400.1	Wheat	plastid	53.29	57.54
KRH42133	Soybean	extracellular	54.11	56.83
KRH18182	Soybean	cytosol	52.6	56.8
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	53.15	56.31
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	52.05	56.05
TraesCS6B01G168800.2	Wheat	plastid	54.52	55.98
KRH42131	Soybean	cytosol, nucleus, plasma membrane	53.42	55.79
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	33.29	55.23
KRH42128	Soybean	plasma membrane	44.11	51.69
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	46.16	51.14
KRH42124	Soybean	cytosol	47.26	51.04
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	47.12	50.15
TraesCS2B01G128700.1	Wheat	plastid	42.47	49.84
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	45.62	46.51
KRH18188	Soybean	cytosol	38.08	43.78
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	40.41	42.82
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	10.82	30.98
TraesCS7B01G488900.1	Wheat	plasma membrane	23.56	16.21
TraesCS2B01G060900.1	Wheat	plasma membrane	23.15	15.6
TraesCS1B01G157900.1	Wheat	endoplasmic reticulum	16.71	15.35
TraesCS6B01G434900.1	Wheat	plasma membrane	23.7	15.31

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF301	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G248000	EnsemblPlants:TraesCS5B01G248000.1	TIGR:cd03213	SEG:seg

Description

No Description!

Coordinates

chr5B:+:429882262..429888307

Molecular Weight (calculated)

79723.9 Da

IEP (calculated)

9.284

GRAVY (calculated)

0.060

Length

730 amino acids

Sequence
(BLAST)

001: MASEQLLPAV PRWKPSPPRQ QSRPHDDEGP SGTASDALGG SLRSTDGFPF GSGSSFPPPP FAPMPVTLPR SRTSSSLEIT VENGAAGAPA VVREASLRRV
101: DQGVVLSWED LWVSAAGGKA GRVPILRGLN GYARPGEVLA IMGPSGCGKS TLLDALAGRL GSGVNQKGDI LINGRRQKLS YGTSAYVTQD DVLMTTLTVR
201: EAVRYSASLQ LPSGMSAAAK RERAEETLRE MGLEGAADTR IGGWMHKGIS GGQRRRVSIC MEILTRPALL FLDEPTSGLD SAASFHVVSR IARLARREGM
301: TVVAAVHQPS TEVYGLFHGL CLLAYGKTVF FGPAAETNQF FALSGFPCPS LMNPSDHFLR TINKDFDNDI EEGLHGKKTT TAENIDALAV SYKSSMHMDK
401: VTRQIANIRS TGGEVVKMEG QQPSFLMQSF VLTKRSFTNM YRDLGYYWLR FAIYIALCLC CGTIFYDIGH NYGSIQARGS MLMFVGAFLT FMAIGGFPSF
501: VEDMKIFGRE RLNGHYGVSS FVIANTVSAT PYLLLISLVP GAIAYYLVGL QRSFDHFAYF ALVLFMTMML VEGLMMIVAS AVPDFLMGII TGAGIQGVMM
601: LNGGFFRLPH DLPKPVWRYP MYYVAFHKYA NQGFYKNEFL GLTFPNNQAG GAATITGDQI LRDYWQVEMG YNKWVDLAVL FGMVILYRVL FLAIMKLAEK
701: VKPMVNGLRF RSTQPSVHIA DQGSKANGAM

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.