Factsheet for TraesCS6B01G168800.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G128600.1	Wheat	plastid	96.48	96.62
TraesCS6A01G140300.2	Wheat	plastid	96.34	96.61
HORVU6Hr1G027440.10	Barley	plastid	87.34	89.61
Os12t0411700-01	Rice	plastid	78.76	78.54
OQU84078	Sorghum	cytosol, plasma membrane	63.01	77.91
Zm00001d048621_P001	Maize	plastid	75.11	74.17
GSMUA_AchrUn_...	Banana	plasma membrane	52.46	62.79
GSMUA_Achr10P...	Banana	plasma membrane	35.72	60.77
GSMUA_Achr6P04180_001	Banana	plasma membrane	50.07	60.24
TraesCS7B01G490800.1	Wheat	peroxisome	49.09	59.66
TraesCS7B01G490700.1	Wheat	plastid	36.15	58.81
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.83	58.02
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.9	57.55
TraesCS2B01G128800.1	Wheat	plasma membrane	38.4	57.35
GSMUA_AchrUn_...	Banana	plasma membrane	46.55	56.48
TraesCS2B01G128400.1	Wheat	plastid	52.74	55.47
TraesCS5B01G248000.1	Wheat	plasma membrane, plastid	55.98	54.52
TraesCS5B01G247800.1	Wheat	plasma membrane, plastid	55.98	54.3
TraesCS5B01G247700.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	55.56	53.89
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.95	53.62
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	47.96	52.87
KRH42130	Soybean	plasma membrane	46.84	51.95
PGSC0003DMT400043270	Potato	cytosol	46.98	51.23
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	48.38	49.93
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	46.13	49.77
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	48.38	49.64
TraesCS2B01G128700.1	Wheat	plastid	43.18	49.36
KRH42131	Soybean	cytosol, nucleus, plasma membrane	48.24	49.07
KRH18182	Soybean	cytosol	46.55	48.96
KRH42133	Soybean	extracellular	47.68	48.78
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	46.41	48.67
KRH42128	Soybean	plasma membrane	42.48	48.48
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	29.4	47.5
KRH42124	Soybean	cytosol	44.44	46.75
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	44.44	46.06
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	43.04	42.74
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	38.26	39.48
KRH18188	Soybean	cytosol	34.04	38.11
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	9.85	27.45
TraesCS7B01G488900.1	Wheat	plasma membrane	23.49	15.74
TraesCS2B01G060900.1	Wheat	plasma membrane	22.64	14.87
TraesCS6B01G434900.1	Wheat	plasma membrane	22.93	14.42
TraesCS1B01G157900.1	Wheat	endoplasmic reticulum	15.19	13.58

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF295	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G168800	EnsemblPlants:TraesCS6B01G168800.2	SEG:seg	:

Description

No Description!

Coordinates

chr6B:+:179458639..179466719

Molecular Weight (calculated)

77785.8 Da

IEP (calculated)

8.766

GRAVY (calculated)

0.108

Length

711 amino acids

Sequence
(BLAST)

001: MAVSSPLPRW APTPSPSRPL WRWGGGTPDA QTGSGGGSAG WSLGRIFPWA SAWQRRAPAG VDGRGPAGFD GVEAAPSTRA AVAPAPARWA GTDEDPGVFL
101: TWEDVCVTVA GGTYGAQPVS ILSGITGHAG PGEVLAIMGP SGCGKTTLLD TLAGRLGPGI TETGSILING RREKLAFGTS AYVTQDNVLM STMSVREAIY
201: YSAQLQLPGS MSAEEKRAHA DAVIREMGLG DAMDTRIGGR MTKGISGGQR KRVTICVEML TRPRLLFLDE PTSGLDSAAS YHVMSHIARV AAREGMTVVA
301: AVHQPCGDVF DLFHRLCLLA YGRTVFFGPA SDATQFFTES GFPCPHLRNP SDHFLRTINK DFDEVEIVES SKARRKPAAE AIEILTDAYQ SPAYSEKTMD
401: RIAEMKGIGG APFRKREQAS FSTKLFVLTR RSFVNMHRDI GYYWMRLGVY LGIGICLGTI FYQVGHSYSS IQSRCEVIMY TTALITFMAI GGFPSFVEDV
501: KVFRRERLSG HYGVAEFVIS NTLSATPYLA VIAVIPGAML YYLTGLMKGP DRFAYFVINL CMCTLLVESM MMIIAVIVPD FLMGIIVGAG VQGVMMLNGG
601: FFRLPNELPK PVWKYPCYYI SFHKYAVQGF YKNEFIGQTF PSDQLVEKNV TISGLWVLQE KLQVEMGYSK WVNIAILCGM MVVYRVLFFA IVKIAEEVRP
701: KLRGMRCKLC K

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.