Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G091510.2 | Barley | mitochondrion | 88.58 | 95.88 |
| TraesCS6D01G380300.1 | Wheat | plasma membrane | 97.7 | 92.08 |
| TraesCS6A01G395000.2 | Wheat | plasma membrane, plastid | 97.96 | 88.92 |
| Os11t0416900-01 | Rice | plasma membrane | 79.91 | 82.02 |
| KXG31382 | Sorghum | plasma membrane | 76.9 | 78.71 |
| Zm00001d018500_P002 | Maize | plasma membrane | 75.66 | 76.89 |
| TraesCS7B01G488900.1 | Wheat | plasma membrane | 68.94 | 73.42 |
| GSMUA_Achr4P12050_001 | Banana | mitochondrion, plasma membrane | 64.25 | 68.95 |
| GSMUA_Achr4P05530_001 | Banana | plasma membrane | 61.06 | 68.66 |
| CDY25855 | Canola | plasma membrane | 52.83 | 57.57 |
| VIT_13s0019g04600.t01 | Wine grape | plasma membrane | 56.99 | 57.5 |
| KRG91932 | Soybean | plasma membrane | 56.37 | 57.13 |
| Bra038121.1-P | Field mustard | plasma membrane | 53.1 | 56.93 |
| Solyc04g025170.2.1 | Tomato | mitochondrion | 51.33 | 56.86 |
| KRH34842 | Soybean | plasma membrane | 56.11 | 56.81 |
| CDY51880 | Canola | plasma membrane | 52.83 | 56.64 |
| CDY62076 | Canola | plasma membrane | 54.07 | 56.26 |
| KRH71703 | Soybean | plasma membrane | 55.4 | 56.24 |
| CDY24100 | Canola | plasma membrane | 53.89 | 56.08 |
| CDY62072 | Canola | endoplasmic reticulum, golgi, plasma membrane | 52.83 | 56.06 |
| CDY24098 | Canola | plasma membrane | 52.83 | 56.06 |
| AT1G53390.1 | Thale cress | plasma membrane | 54.78 | 55.82 |
| Bra039668.1-P | Field mustard | plasma membrane | 53.63 | 55.8 |
| TraesCS2B01G060900.1 | Wheat | plasma membrane | 52.04 | 54.29 |
| TraesCS1B01G157900.1 | Wheat | endoplasmic reticulum | 35.4 | 50.31 |
| Bra039669.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 50.18 | 50.13 |
| TraesCS7B01G490700.1 | Wheat | plastid | 11.33 | 29.29 |
| TraesCS2B01G128400.1 | Wheat | plastid | 14.6 | 24.41 |
| TraesCS1B01G181300.2 | Wheat | cytosol, peroxisome, plasma membrane | 15.22 | 24.02 |
| TraesCS5B01G247700.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 15.58 | 24.01 |
| TraesCS5B01G247800.1 | Wheat | plasma membrane, plastid | 15.58 | 24.01 |
| TraesCS7B01G490800.1 | Wheat | peroxisome | 12.39 | 23.93 |
| TraesCS5B01G248000.1 | Wheat | plasma membrane, plastid | 15.31 | 23.7 |
| TraesCS6B01G168800.2 | Wheat | plastid | 14.42 | 22.93 |
| TraesCS1B01G147700.1 | Wheat | nucleus, peroxisome, plasma membrane | 13.89 | 22.79 |
| TraesCS2B01G128800.1 | Wheat | plasma membrane | 9.47 | 22.48 |
| TraesCS2B01G128700.1 | Wheat | plastid | 11.86 | 21.54 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF448 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G434900 |
| EnsemblPlants:TraesCS6B01G434900.1 | TIGR:cd03213 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:+:703283589..703288511
Molecular Weight (calculated)
123583.0 Da
IEP (calculated)
8.359
GRAVY (calculated)
-0.111
Length
1130 amino acids
Sequence
(BLAST)
(BLAST)
0001: MARVAGQQLA AALLLLTSAA AARAIAIGSP AYNVVPRLSS FEEHAAVVVP RLSFAEHALD DDYGGDGVGG GAASAAGGKG LVGNPVVAEI VNKRLKGLTA
0101: TFARAIRSQL GYCIKDTDSE WDAAFNFTKD TSFLNNCMKQ TNGDLHQRVC TAAEMKFYFN SLIESGEETR WEKSYVRPNK NCNLSSWIDG CEPGWACSAG
0201: QQKVDLQDAK DIPYRADDCQ ACCPGFFCPH ALTCMIPCPL GAYCPLSTLN KTTGICDPYN YQPPAGNPNH TCGSADNWAD VMSTDDVFCP AGFYCPSTTQ
0301: KLPCSSGYYC RKGSTSQTRC YKKSACPPNS VNQDITIFGM LLVIASCLVL LIIYNFSGQL LTNREKKQAK SREAAARYAK ETAQARERWK TAREVAKKAS
0401: TGLQSQLSRT FSRKQKPGQP GGMSSKGLPP VGTDGAGKKE NLPDMMSSLE ENPDGPEGFN MEIGDKTGKK PKGKQMHSRS QIFKYAYGQI EKEKAIQQEM
0501: EENDNNMSLS GVVSMAKEHE VGSRMPIEVA FKDLTLTLTG SKKKILRSVS GKLMPGRVAA VMGPSGAGKT TFLSAVAGKA TGCDTSGLVL INGKVEPIRA
0601: YKRIIGFVPQ DDIVHGNLTV EENLWFNARC RLAADMSKAE KVLVVERVIE SLGLQPVRDS LVGTVEQRGI SGGQRKRVNV GVEMVMEPSV LILDEPTSGL
0701: DSASSLLLLR ALRREALEGV NISMVVHQPS YTLYRMFDDL ILLAKGGMTV YHGPVKKVEE YFSGLGIVVP DRVNPPDYYI DILEGIVKPN MSAGVTVKDL
0801: PLRWMVHNGY DVPRDMLQST SGSGSESSSR GGTDASSPGA DASPSFLSEM WANIKDTIMQ KKDEFDYNKS TLDLSNRNTP GILRQYRYFL GRVGKQRLRE
0901: ARILAVDYLI LCLAGICLGT LAKVSDETFG ALGYTYTVIA VSLLCKIGAL RSFALDKIYY WRERASGMSS LAYFMAKDTI DHFNTIVKPI VYLSMFYFFN
1001: NPRSSIWENY VVLVALVYCV TGIGYTFAIF FQPGSAQLWS ALLPVVLTLI ATQQKDTIIA DLCYTKWALE AFVIANAHNY TGVWLITRCG SLQSNGYDIS
1101: NRSLCLWVLV ANGVIFRCVA FFCMVVFQKH
0101: TFARAIRSQL GYCIKDTDSE WDAAFNFTKD TSFLNNCMKQ TNGDLHQRVC TAAEMKFYFN SLIESGEETR WEKSYVRPNK NCNLSSWIDG CEPGWACSAG
0201: QQKVDLQDAK DIPYRADDCQ ACCPGFFCPH ALTCMIPCPL GAYCPLSTLN KTTGICDPYN YQPPAGNPNH TCGSADNWAD VMSTDDVFCP AGFYCPSTTQ
0301: KLPCSSGYYC RKGSTSQTRC YKKSACPPNS VNQDITIFGM LLVIASCLVL LIIYNFSGQL LTNREKKQAK SREAAARYAK ETAQARERWK TAREVAKKAS
0401: TGLQSQLSRT FSRKQKPGQP GGMSSKGLPP VGTDGAGKKE NLPDMMSSLE ENPDGPEGFN MEIGDKTGKK PKGKQMHSRS QIFKYAYGQI EKEKAIQQEM
0501: EENDNNMSLS GVVSMAKEHE VGSRMPIEVA FKDLTLTLTG SKKKILRSVS GKLMPGRVAA VMGPSGAGKT TFLSAVAGKA TGCDTSGLVL INGKVEPIRA
0601: YKRIIGFVPQ DDIVHGNLTV EENLWFNARC RLAADMSKAE KVLVVERVIE SLGLQPVRDS LVGTVEQRGI SGGQRKRVNV GVEMVMEPSV LILDEPTSGL
0701: DSASSLLLLR ALRREALEGV NISMVVHQPS YTLYRMFDDL ILLAKGGMTV YHGPVKKVEE YFSGLGIVVP DRVNPPDYYI DILEGIVKPN MSAGVTVKDL
0801: PLRWMVHNGY DVPRDMLQST SGSGSESSSR GGTDASSPGA DASPSFLSEM WANIKDTIMQ KKDEFDYNKS TLDLSNRNTP GILRQYRYFL GRVGKQRLRE
0901: ARILAVDYLI LCLAGICLGT LAKVSDETFG ALGYTYTVIA VSLLCKIGAL RSFALDKIYY WRERASGMSS LAYFMAKDTI DHFNTIVKPI VYLSMFYFFN
1001: NPRSSIWENY VVLVALVYCV TGIGYTFAIF FQPGSAQLWS ALLPVVLTLI ATQQKDTIIA DLCYTKWALE AFVIANAHNY TGVWLITRCG SLQSNGYDIS
1101: NRSLCLWVLV ANGVIFRCVA FFCMVVFQKH
0001: MGRRNSYFPG NFVPLFFVFI VLILQQERVI CQEDRSLDNP AANRLYNQFV FDKISNLTEV FEDDIKRELG FCITNVKEDY NEAFNFSTKP DFLNACGKTT
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
Arabidopsis Description
ABCG28ABC transporter G family member 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF46]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.