Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G106900.1 | Wheat | plasma membrane | 95.0 | 95.0 |
| HORVU7Hr1G122580.37 | Barley | endoplasmic reticulum, vacuole | 69.93 | 84.61 |
| OQU76478 | Sorghum | plasma membrane | 30.16 | 84.21 |
| Os06t0731200-01 | Rice | plasma membrane | 71.16 | 75.88 |
| Zm00001d046068_P001 | Maize | plasma membrane | 73.8 | 75.29 |
| TraesCS6B01G434900.1 | Wheat | plasma membrane | 73.42 | 68.94 |
| GSMUA_Achr4P12050_001 | Banana | mitochondrion, plasma membrane | 67.2 | 67.71 |
| GSMUA_Achr4P05530_001 | Banana | plasma membrane | 63.34 | 66.87 |
| CDY25855 | Canola | plasma membrane | 54.85 | 56.12 |
| VIT_13s0019g04600.t01 | Wine grape | plasma membrane | 59.19 | 56.07 |
| Bra038121.1-P | Field mustard | plasma membrane | 55.23 | 55.6 |
| Solyc04g025170.2.1 | Tomato | mitochondrion | 53.16 | 55.29 |
| CDY51880 | Canola | plasma membrane | 54.85 | 55.22 |
| KRH34842 | Soybean | plasma membrane | 57.87 | 55.02 |
| KRG91932 | Soybean | plasma membrane | 57.59 | 54.8 |
| CDY62076 | Canola | plasma membrane | 56.08 | 54.79 |
| CDY24100 | Canola | plasma membrane | 55.98 | 54.7 |
| Bra039668.1-P | Field mustard | plasma membrane | 55.89 | 54.6 |
| CDY62072 | Canola | endoplasmic reticulum, golgi, plasma membrane | 54.57 | 54.37 |
| CDY24098 | Canola | plasma membrane | 54.57 | 54.37 |
| KRH71703 | Soybean | plasma membrane | 57.02 | 54.36 |
| AT1G53390.1 | Thale cress | plasma membrane | 56.17 | 53.74 |
| TraesCS2B01G060900.1 | Wheat | plasma membrane | 53.44 | 52.35 |
| TraesCS1B01G157900.1 | Wheat | endoplasmic reticulum | 36.48 | 48.68 |
| Bra039669.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 51.84 | 48.63 |
| TraesCS7B01G490700.1 | Wheat | plastid | 12.54 | 30.43 |
| TraesCS7B01G490800.1 | Wheat | peroxisome | 13.76 | 24.96 |
| TraesCS5B01G247700.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 16.59 | 24.01 |
| TraesCS5B01G247800.1 | Wheat | plasma membrane, plastid | 16.59 | 24.01 |
| TraesCS2B01G128400.1 | Wheat | plastid | 15.17 | 23.82 |
| TraesCS1B01G181300.2 | Wheat | cytosol, peroxisome, plasma membrane | 16.02 | 23.74 |
| TraesCS5B01G248000.1 | Wheat | plasma membrane, plastid | 16.21 | 23.56 |
| TraesCS6B01G168800.2 | Wheat | plastid | 15.74 | 23.49 |
| TraesCS1B01G147700.1 | Wheat | nucleus, peroxisome, plasma membrane | 14.8 | 22.79 |
| TraesCS2B01G128800.1 | Wheat | plasma membrane | 9.99 | 22.27 |
| TraesCS2B01G128700.1 | Wheat | plastid | 13.01 | 22.19 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF01061 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF448 | SMART:SM00382 |
| SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G488900 | EnsemblPlants:TraesCS7B01G488900.1 | TIGR:cd03213 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:743141287..743146766
Molecular Weight (calculated)
116795.0 Da
IEP (calculated)
8.695
GRAVY (calculated)
-0.131
Length
1061 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAAGAPALL PTTLLLLLLL LLYGVSVAEA WQDITTKDAI LLGLNGKMKE MTRVFAPQVK RELGYCIQDT DAEWDATFNF SGDPKFLVDC MKKGDLPQRV
0101: CTAAELKFYF ESIIRRGKKN YVRPNKNCNL TSWIDGCEPG WGCTADAGKE VDLRDAENFP SRTVDCQGCC PGFLCPRGLT CMIPCPLGAY CPQSTLNKAT
0201: GVCDPYNYQP PPGQPNHTCG GADRWSDVMS TDDVFCPAGY YCPSPILKID CSSGFYCRKG STTQTKCLSK GSCKPNSTTQ DITIFGAMLV VALSLVLLII
0301: YNFSDQLLTN REKKQAKSRE AAVRLAKETV QARERWRSAK DVAKKHAAGL QTSLTRTFSR KKSLGTHESS KGHPPEEHGA EESGGKNTGG SPTAAAEVGG
0401: DKKKKGGKHA HTQSQIFQYA YGQIEKEKAL EQEMEQNSNN LSLSGVVAMA TDEDLRQRPR IEIAFKDITL ILKGSKKKLL RSVSGKLMPG RVAAVMGPSG
0501: AGKTTLLSAI AGKATGCATT GTILINGKQE PIRAYKKIIG FVPQDDIVHG NLTVQENLWF NARCRLPVEM SQAEKVLVVE RVIESLGLQP VRDSLVGTVE
0601: KRGISGGQRK RVNVGLEMVM EPSVLILDEP TSGLDSASSL LLLRALRREA MEGVNISMVV HQPSYTLYNM FDDLILLAKG GMPVYHGPVK KVEEYFKGLG
0701: IVVPDRVNPP DYYIDILEGI VKLDMNAGNV KDLPLRWMLH NGYEVPRDML QSSSGSKSSL SGEAGGHAPQ AEAKKSLLGE LWGNLRDILG QKKDEYDYNK
0801: SSEDLSNRRT PGKLRQYKYY LGRCGKQRLR ESSIQGVDFL ILGLAGICLG TLAKVSDESF GALGYTYTVI AVSLLCMIGA LRSFSLEKIH YWRERAAGMS
0901: SLAYFMSKDT IDHFNTIVKP IVYLSMFYFF NNPRSSIWEN YVVLVAVVYC VTGIGYTFAI FFQPGSAQLW SALLPVVLTL FSNEQKDSVF ANLCYTKWAL
1001: EAFVIANAQR YSGVWLITRC GSLMKTGYDI DHKITCILVL AANGIVFRCI AFFCMVIFQK H
0101: CTAAELKFYF ESIIRRGKKN YVRPNKNCNL TSWIDGCEPG WGCTADAGKE VDLRDAENFP SRTVDCQGCC PGFLCPRGLT CMIPCPLGAY CPQSTLNKAT
0201: GVCDPYNYQP PPGQPNHTCG GADRWSDVMS TDDVFCPAGY YCPSPILKID CSSGFYCRKG STTQTKCLSK GSCKPNSTTQ DITIFGAMLV VALSLVLLII
0301: YNFSDQLLTN REKKQAKSRE AAVRLAKETV QARERWRSAK DVAKKHAAGL QTSLTRTFSR KKSLGTHESS KGHPPEEHGA EESGGKNTGG SPTAAAEVGG
0401: DKKKKGGKHA HTQSQIFQYA YGQIEKEKAL EQEMEQNSNN LSLSGVVAMA TDEDLRQRPR IEIAFKDITL ILKGSKKKLL RSVSGKLMPG RVAAVMGPSG
0501: AGKTTLLSAI AGKATGCATT GTILINGKQE PIRAYKKIIG FVPQDDIVHG NLTVQENLWF NARCRLPVEM SQAEKVLVVE RVIESLGLQP VRDSLVGTVE
0601: KRGISGGQRK RVNVGLEMVM EPSVLILDEP TSGLDSASSL LLLRALRREA MEGVNISMVV HQPSYTLYNM FDDLILLAKG GMPVYHGPVK KVEEYFKGLG
0701: IVVPDRVNPP DYYIDILEGI VKLDMNAGNV KDLPLRWMLH NGYEVPRDML QSSSGSKSSL SGEAGGHAPQ AEAKKSLLGE LWGNLRDILG QKKDEYDYNK
0801: SSEDLSNRRT PGKLRQYKYY LGRCGKQRLR ESSIQGVDFL ILGLAGICLG TLAKVSDESF GALGYTYTVI AVSLLCMIGA LRSFSLEKIH YWRERAAGMS
0901: SLAYFMSKDT IDHFNTIVKP IVYLSMFYFF NNPRSSIWEN YVVLVAVVYC VTGIGYTFAI FFQPGSAQLW SALLPVVLTL FSNEQKDSVF ANLCYTKWAL
1001: EAFVIANAQR YSGVWLITRC GSLMKTGYDI DHKITCILVL AANGIVFRCI AFFCMVIFQK H
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.