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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24100 Canola plasma membrane 83.68 85.45
CDY62076 Canola plasma membrane 83.32 85.08
Bra039668.1-P Field mustard plasma membrane 83.32 85.08
CDY25855 Canola plasma membrane 79.26 84.76
CDY51880 Canola plasma membrane 80.16 84.35
Bra038121.1-P Field mustard plasma membrane 80.07 84.25
CDY62072 Canola endoplasmic reticulum, golgi, plasma membrane 76.92 80.09
CDY24098 Canola plasma membrane 76.19 79.34
Bra039669.1-P Field mustard cytosol, peroxisome, plasma membrane 72.95 71.53
KRG91932 Soybean plasma membrane 65.19 64.84
KRH34842 Soybean plasma membrane 64.47 64.07
VIT_13s0019g04600.t01 Wine grape plasma membrane 64.29 63.66
KRH71703 Soybean plasma membrane 63.3 63.07
OQU76478 Sorghum plasma membrane 21.1 61.58
GSMUA_Achr4P12050_001 Banana mitochondrion, plasma membrane 57.26 60.3
Solyc04g025170.2.1 Tomato mitochondrion 55.46 60.29
GSMUA_Achr4P05530_001 Banana plasma membrane 54.28 59.9
HORVU6Hr1G091510.2 Barley mitochondrion 55.73 59.2
GSMUA_Achr8P14250_001 Banana plasma membrane 52.84 58.08
AT2G37010.1 Thale cress plasma membrane 56.36 57.76
Os06t0731200-01 Rice plasma membrane 51.49 57.39
AT5G60740.1 Thale cress plasma membrane 57.35 57.35
GSMUA_Achr11P... Banana plasma membrane 51.85 57.21
TraesCSU01G106900.1 Wheat plasma membrane 54.46 56.93
Zm00001d046068_P001 Maize plasma membrane 53.29 56.83
Os11t0416900-01 Rice plasma membrane 56.27 56.68
TraesCS7B01G488900.1 Wheat plasma membrane 53.74 56.17
KXG31382 Sorghum plasma membrane 55.0 55.25
HORVU7Hr1G122580.37 Barley endoplasmic reticulum, vacuole 43.55 55.07
TraesCS6B01G434900.1 Wheat plasma membrane 55.82 54.78
Zm00001d018500_P002 Maize plasma membrane 54.46 54.32
Os04t0194500-01 Rice plasma membrane 51.76 53.9
Zm00001d004335_P001 Maize plasma membrane 51.4 52.1
TraesCS6D01G380300.1 Wheat plasma membrane 55.91 51.71
TraesCS2B01G060900.1 Wheat plasma membrane 50.41 51.62
TraesCS2A01G049700.2 Wheat plasma membrane 50.23 51.57
KXG25878 Sorghum plasma membrane 50.95 51.55
TraesCS2D01G048800.1 Wheat plasma membrane 50.23 51.48
Zm00001d025031_P001 Maize plasma membrane 50.59 50.95
TraesCS6A01G395000.2 Wheat plasma membrane, plastid 56.0 49.88
AT1G17840.1 Thale cress cytosol, peroxisome, plasma membrane 15.42 24.32
AT1G51500.1 Thale cress cytosol, peroxisome, plasma membrane 14.43 23.29
AT3G21090.1 Thale cress cytosol, peroxisome, plasma membrane 14.25 22.87
AT1G51460.1 Thale cress plasma membrane 13.98 22.86
AT2G28070.1 Thale cress plastid 13.98 21.23
AT3G21080.1 Thale cress cytosol, peroxisome, plasma membrane 3.88 16.86
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:841775InterPro:AAA+_ATPaseProteinID:AAF69540.1InterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AEE32936.1EMBL:AK227394ArrayExpress:AT1G53390EnsemblPlantsGene:AT1G53390
RefSeq:AT1G53390TAIR:AT1G53390RefSeq:AT1G53390-TAIR-GEnsemblPlants:AT1G53390.1TAIR:AT1G53390.1Unigene:At.37411
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439RefSeq:NP_175745.4InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020094PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF304UniProt:Q9MAG3SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00015057A9SEG:seg::
Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
Coordinates
chr1:+:19917994..19923920
Molecular Weight (calculated)
122884.0 Da
IEP (calculated)
9.461
GRAVY (calculated)
-0.113
Length
1109 amino acids
Sequence
(BLAST)
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.