Factsheet for AT1G17840.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26211	Canola	cytosol, peroxisome, plasma membrane	93.74	97.49
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	93.46	97.19
CDY19179	Canola	cytosol, peroxisome, plasma membrane	93.46	97.19
CDX96749	Canola	cytosol, peroxisome, plasma membrane	92.75	96.31
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	95.87	96.15
CDX83888	Canola	cytosol, peroxisome, plasma membrane	92.46	95.73
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	84.92	84.68
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	83.78	83.31
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	83.64	83.29
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	81.65	81.19
Solyc03g019760.2.1	Tomato	nucleus	81.65	80.85
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	76.53	80.66
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	79.23	80.38
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	77.52	76.12
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	77.24	75.84
Os10t0494300-01	Rice	extracellular, plasma membrane	77.67	75.52
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	75.96	74.79
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	76.1	74.2
Os04t0528300-01	Rice	plasma membrane	74.96	74.12
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	74.68	73.94
TraesCSU01G020100.1	Wheat	plasma membrane	74.54	73.18
TraesCS2A01G374100.1	Wheat	plasma membrane	74.4	72.84
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	73.68	70.38
TraesCS1A01G164500.1	Wheat	cytosol	68.28	69.97
HORVU2Hr1G090960.2	Barley	cytosol	74.11	68.92
OQU82009	Sorghum	mitochondrion	75.53	68.08
TraesCS2D01G370400.2	Wheat	plastid	74.4	67.4
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	66.86	65.28
AT1G51500.1	Thale cress	cytosol, peroxisome, plasma membrane	52.49	53.71
AT3G21090.1	Thale cress	cytosol, peroxisome, plasma membrane	51.78	52.68
AT1G51460.1	Thale cress	plasma membrane	47.65	49.41
AT2G28070.1	Thale cress	plastid	33.85	32.6
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	11.52	31.76
AT2G37010.1	Thale cress	plasma membrane	24.32	15.8
AT1G53390.1	Thale cress	plasma membrane	24.32	15.42
AT5G60740.1	Thale cress	plasma membrane	23.61	14.97

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:838363	UniProt:A0A178WKJ6	InterPro:AAA+_ATPase
ProteinID:AAF97264.1	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEE29642.1	ArrayExpress:AT1G17840
EnsemblPlantsGene:AT1G17840	RefSeq:AT1G17840	TAIR:AT1G17840	RefSeq:AT1G17840-TAIR-G	EnsemblPlants:AT1G17840.1	TAIR:AT1G17840.1
EMBL:AY080792	EMBL:AY150457	Unigene:At.70679	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0009611	GO:GO:0009628	GO:GO:0009651	GO:GO:0009653	GO:GO:0009719	GO:GO:0009737
GO:GO:0009790	GO:GO:0009791	GO:GO:0009897	GO:GO:0010222	GO:GO:0010588	GO:GO:0015245
GO:GO:0015908	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0042803	GO:GO:0055085	GO:GO:0080051	InterPro:IPR003439	RefSeq:NP_173226.2	ProteinID:OAP18848.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PO:PO:0000013	PO:PO:0000014	PO:PO:0000016
PO:PO:0000035	PO:PO:0000036	PO:PO:0000037	PO:PO:0000039	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004013
PO:PO:0004507	PO:PO:0005417	PO:PO:0006016	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025025
PO:PO:0025029	PO:PO:0025281	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271
UniProt:Q8RXN0	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00000AC37D	Symbol:WBC11
SEG:seg	:	:	:	:	:

Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]

Coordinates

chr1:+:6142402..6146521

Molecular Weight (calculated)

78417.0 Da

IEP (calculated)

8.825

GRAVY (calculated)

0.133

Length

703 amino acids

Sequence
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.