CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	90.51	97.92
Os04t0528300-01	Rice	plasma membrane	85.77	94.09
TraesCS2A01G374100.1	Wheat	plasma membrane	84.49	91.78
TraesCSU01G020100.1	Wheat	plasma membrane	84.23	91.76
TraesCS2D01G370400.2	Wheat	plastid	86.28	86.73
HORVU2Hr1G090960.2	Barley	cytosol	82.31	84.92
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	71.15	80.09
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	67.69	79.16
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.9	78.44
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	70.51	77.9
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	70.38	77.65
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	70.38	76.89
Solyc03g019760.2.1	Tomato	nucleus	69.36	76.2
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	68.59	75.67
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	68.08	75.53
CDY19179	Canola	cytosol, peroxisome, plasma membrane	64.87	74.85
CDY26211	Canola	cytosol, peroxisome, plasma membrane	64.74	74.7
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.92	74.47
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.49	74.41
CDX83888	Canola	cytosol, peroxisome, plasma membrane	64.49	74.08
CDX96749	Canola	cytosol, peroxisome, plasma membrane	64.23	74.0
PGSC0003DMT400069344	Potato	plasma membrane	26.41	73.05
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	60.26	71.21
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	57.31	68.14
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	60.64	66.15
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	46.15	52.33
OQU84078	Sorghum	cytosol, plasma membrane	35.51	48.17
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	41.79	44.41
KXG19944	Sorghum	plastid	40.64	43.54
KXG34927	Sorghum	plastid	38.08	42.49
EER90467	Sorghum	cytosol, plasma membrane, plastid	30.51	32.96
OQU76478	Sorghum	plasma membrane	9.23	18.95
OQU91719	Sorghum	plasma membrane	20.64	17.31
KXG25878	Sorghum	plasma membrane	22.31	15.88
KXG31382	Sorghum	plasma membrane	22.44	15.85

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1Z5REI5	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	EnsemblPlants:OQU82009	ProteinID:OQU82009	ProteinID:OQU82009.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SMART:SM00382
EnsemblPlantsGene:SORBI_3006G155700	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B8B9843	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:51486353..51493123

Molecular Weight (calculated)

85398.9 Da

IEP (calculated)

9.314

GRAVY (calculated)

0.081

Length

780 amino acids

Sequence
(BLAST)

001: MRARLDGVAP LPLHRIDRPV PLSRHDAPQP SARPRHASLP AAPSPSSAQG APAVPAMRRA GGGDLQGDHG TTPRSAAAGQ AMVELQANGS AAAAGGAMVV
101: GLSPLSETLW RDSKALPPGA GPAALIGDVS ARLTWKDLCV TVALGPGKTQ TVLDELTGYA EPGSLTALMG PSGSGKSTLL DALAGRLAAN AFLSGDVLLN
201: GRKAKLSFGA AAYVTQDDNL IGTLTVRETI GYSALLRLPD KMPREDKRAL VEGTIVEMGL QDCADTVIGN WHLRGVSGGE KRRVSIALEL LMRPRLLFLD
301: EPTSGLDSSS AFFVTQTLRG LARDGRTVIA SIHQPSSEVF ELFDMLFLLS GGKTVYFGQA SQACEFFAQG GFPCPPLRNP SDHFLRCVNS DFDKVKATLK
401: GSMKARAERS DDPLDRMTTS EAIRKLVGSY SRSQYYYAAR EKVNDISRMK GTVLDSGGSQ ASFLMQACTL TKRSFINMSR DFGYYWLRLL IYLLVTVCIG
501: TIYLDVGTKY TSILARASCS AFVFGFVTFM SIGGFPSFVE EMKVFQRERL NGHYGVAAFV ISNTISATPF LILICFLSGT ICYFMVRLHP GFEHYIFFVL
601: NLYASVTVVE SLMMAIASVI PNFLMGIIIG AGIQGIFMLV SGYFRLPYDI PKPFWRYPMQ YISFHYWALQ GQCQNDMKGL VFDNQYPDQP KIPGDFILKY
701: IFQINVDRNK WIDLSVIFSM IFIYRILFFL MIKINEDVLP WIRGHIARKR MQKKGPSPSF GKTPSLRGYV VDPELGSNEG

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.