CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019398_P001	Maize	plastid	87.7	88.46
TraesCS2B01G128800.1	Wheat	plasma membrane	50.79	74.58
HORVU2Hr1G019010.2	Barley	plasma membrane	42.92	71.6
TraesCS2D01G110800.1	Wheat	plastid	68.67	70.8
Os07t0288700-02	Rice	plastid	73.53	70.51
TraesCS2B01G128400.1	Wheat	plastid	67.95	70.27
TraesCS2D01G110700.1	Wheat	plastid	66.81	69.6
TraesCS2A01G110200.1	Wheat	plastid	66.67	69.45
GSMUA_AchrUn_...	Banana	plasma membrane	53.08	62.46
GSMUA_Achr10P...	Banana	plasma membrane	36.62	61.24
TraesCS2B01G128700.1	Wheat	plastid	53.93	60.61
GSMUA_Achr6P04180_001	Banana	plasma membrane	51.22	60.58
HORVU2Hr1G018920.1	Barley	cytosol	43.78	59.88
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	20.74	59.67
OQU84078	Sorghum	cytosol, plasma membrane	48.07	58.43
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.21	58.3
GSMUA_AchrUn_...	Banana	plasma membrane	47.78	57.0
KXG19944	Sorghum	plastid	56.8	54.53
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	49.5	53.64
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	55.94	53.27
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.93	52.7
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	51.79	52.24
KRH42130	Soybean	plasma membrane	47.5	51.79
KRH42133	Soybean	extracellular	51.36	51.65
KRH18182	Soybean	cytosol	48.93	50.59
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	31.76	50.45
PGSC0003DMT400043270	Potato	cytosol	46.78	50.15
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	48.35	49.85
KRH42131	Soybean	cytosol, nucleus, plasma membrane	49.79	49.79
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	49.07	49.78
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	45.49	48.25
KRH42128	Soybean	plasma membrane	41.77	46.87
KRH42124	Soybean	cytosol	45.21	46.75
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	45.06	45.92
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	42.06	41.18
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	38.91	39.53
KRH18188	Soybean	cytosol	34.62	38.11
OQU82009	Sorghum	mitochondrion	42.49	38.08
EER90467	Sorghum	cytosol, plasma membrane, plastid	30.19	29.22
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	10.59	29.02
OQU76478	Sorghum	plasma membrane	8.44	15.53
OQU91719	Sorghum	plasma membrane	20.6	15.48
KXG25878	Sorghum	plasma membrane	21.17	13.5
KXG31382	Sorghum	plasma membrane	20.74	13.13

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1B6QAH1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
EnsemblPlants:KXG34927	ProteinID:KXG34927	ProteinID:KXG34927.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF260	SMART:SM00382	EnsemblPlantsGene:SORBI_3002G109300
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00081ABD01	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:13284670..13294748

Molecular Weight (calculated)

76469.6 Da

IEP (calculated)

8.859

GRAVY (calculated)

0.204

Length

699 amino acids

Sequence
(BLAST)

001: MAASPLPRWA PTPSPTRPLR VSSTGQTAMP SSCSSSWWAL CHSFIGSVYS PWRRSTPPPS PAGDPANNAV DDHRLGSHPL DCVGARGSSL PEEASHEVFL
101: TWEDLSVTAS SGKAKAAVII DKISGYARPG EVLALMGPSG CGKTTLLDAL AGRLGSDKKK TGNILINGRR EKLAFGTSAY VTQETLLMAT LTVTEAVHYS
201: AQLQLPDSVP AAEKRERADR AIRQMGLAAV AGHRIGGRVC KGISGGQRRR VSICVELLAS PALAFLDEPT SGLDSAASFH VMSRIAGLAR DERVTVVAAM
301: HQPSSEVFQL FHGLCLMAYG RMVYFGPASD AIQFFDANGY ACPMRRNPSD HFLMMINKDF EELEEGSTLL LPCATEVIQT LVDSLISQKS LAITNEAFMM
401: KQGAPFTKKR QASFLTKCVV LTKRSVINMH RDMGYYWLRF GIYIAICVSI GTIFFNVGYS FASIQARGSM LMFTSTLLTM MAIGGFPSFV EDMKVFRKEQ
501: LNGHYGATAF VISNTLSSAP YLGIISIIPG AICYYLTGLQ RGFDHFLYFA AVLWACTMLV EGLMMIVAAI VPDFLLGIIT GSGMQGLLML NAGFFRLPND
601: LPKPLWKYPT YYISYHKYAT QGLYKNEFLG LVFDDLGRGF TITGDYILRT NLQVEMGYSK WVDLAILLVM VLIYRVLFLV TIKVGEAMKP MIKCMSVKV

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.