Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032855_P002 | Maize | plasma membrane | 89.57 | 94.34 |
| TraesCS1A01G141400.1 | Wheat | mitochondrion, plasma membrane | 73.55 | 73.31 |
| HORVU1Hr1G037250.2 | Barley | plasma membrane | 76.24 | 69.65 |
| TraesCS1D01G140400.1 | Wheat | plasma membrane | 76.67 | 69.56 |
| Os10t0442900-01 | Rice | plasma membrane | 63.66 | 66.0 |
| TraesCS1B01G157900.1 | Wheat | endoplasmic reticulum | 55.81 | 65.28 |
| OQU76478 | Sorghum | plasma membrane | 22.47 | 55.0 |
| KXG25878 | Sorghum | plasma membrane | 57.63 | 48.91 |
| KXG31382 | Sorghum | plasma membrane | 55.38 | 46.65 |
| OQU84078 | Sorghum | cytosol, plasma membrane | 15.16 | 24.52 |
| KXG35822 | Sorghum | mitochondrion, nucleus, peroxisome, plasma membrane | 17.74 | 22.48 |
| KXG38261 | Sorghum | cytosol, peroxisome, plasma membrane | 16.99 | 22.13 |
| EES19248 | Sorghum | cytosol, peroxisome, plasma membrane | 15.91 | 21.51 |
| OQU82009 | Sorghum | mitochondrion | 17.31 | 20.64 |
| KXG34927 | Sorghum | plastid | 15.48 | 20.6 |
| KXG19944 | Sorghum | plastid | 16.02 | 20.47 |
| EER90467 | Sorghum | cytosol, plasma membrane, plastid | 13.87 | 17.87 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | UniProt:A0A1Z5S7B6 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| EnsemblPlants:OQU91719 | ProteinID:OQU91719 | ProteinID:OQU91719.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF461 | SMART:SM00382 | EnsemblPlantsGene:SORBI_3001G235900 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI000B8B9DED | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:23788217..23805403
Molecular Weight (calculated)
103476.0 Da
IEP (calculated)
8.113
GRAVY (calculated)
-0.029
Length
930 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIDLEVATL HASMMMSLVC RQSDFNQMFD YTSDTSFASD CMEQTRGEMT SMLCGKAEIE LYIKSLADAS SRSNPRISPN CNQSSWALGC QPGWACMLSD
101: TEPSNETSAE SFPLRAESCR PCCPGFFCPR GLTCMMPCPL GAYCPLGTLN DTTGLCDPYF YQVTPGKNTA CGTADSWADI VTTNDVFCPP GHYCPTTTQK
201: YNCSSGHYCR KGSTDEKKCF WKNTCKDNAI KEDLTLYGII LIAILGFVLL LVYNCSGLFI SLQVKMSSRS RKKAAKRADK SAAARERWKL AKELVLRHEV
301: PTERFGHAYN QADTDRAMKI NNDKLTFSGV VSLATEIRPQ RPTLEVAFRG LTLSIGKKKL LQCVTGKLSP GRVTAIMGPS GAGKTTFLNA VLGKTSGYKK
401: DGIVLINGLP GLMQSYKKII GFVPQDDIVH GNLTVEENMW FSSCCRLSKG MSRSDKVRVL ERVIESLGLQ EIRNSLVGTV EKRGISGGQR KRVNVGIEMV
501: MEPSLLILDE PTTGLDSASS QLLLRALRHE ALEGVNVCAV VHQPSYTLFN MFDDFVLLAR GGLIAYHGPI YEVETYFAGL GIKVPDRENP PDYYIDILEG
601: IVKTKMRGNV TPKHFPLLWM LRNGYEVPDD LQKDLENINT IRELYTVRSI SEQSSEEQSE NTVSVHRNLS PSNELLERKT PGVFAQYGYY LGRVAKQRLR
701: EATQQAVDYL ILCIAGVCIG TIARVRDDSF GVASYGYTIM AVSLLCQLAS LRSFSPEKLQ YWRERQSGMS SLAYFLARDT IDHFNTAVKP IIFLSTFYFF
801: NNPRSTLRDN YLVLLALIYC VTGVGYTFAI WFELGLAQLS SAIVPVVLVL VGTKPDLPRV IRELCYTKWA LQAFIIAGAK EYSGVWLITR CGALLQGGYD
901: INEFNLCITI IMLHGVLFRL VAFLSMLKLK
101: TEPSNETSAE SFPLRAESCR PCCPGFFCPR GLTCMMPCPL GAYCPLGTLN DTTGLCDPYF YQVTPGKNTA CGTADSWADI VTTNDVFCPP GHYCPTTTQK
201: YNCSSGHYCR KGSTDEKKCF WKNTCKDNAI KEDLTLYGII LIAILGFVLL LVYNCSGLFI SLQVKMSSRS RKKAAKRADK SAAARERWKL AKELVLRHEV
301: PTERFGHAYN QADTDRAMKI NNDKLTFSGV VSLATEIRPQ RPTLEVAFRG LTLSIGKKKL LQCVTGKLSP GRVTAIMGPS GAGKTTFLNA VLGKTSGYKK
401: DGIVLINGLP GLMQSYKKII GFVPQDDIVH GNLTVEENMW FSSCCRLSKG MSRSDKVRVL ERVIESLGLQ EIRNSLVGTV EKRGISGGQR KRVNVGIEMV
501: MEPSLLILDE PTTGLDSASS QLLLRALRHE ALEGVNVCAV VHQPSYTLFN MFDDFVLLAR GGLIAYHGPI YEVETYFAGL GIKVPDRENP PDYYIDILEG
601: IVKTKMRGNV TPKHFPLLWM LRNGYEVPDD LQKDLENINT IRELYTVRSI SEQSSEEQSE NTVSVHRNLS PSNELLERKT PGVFAQYGYY LGRVAKQRLR
701: EATQQAVDYL ILCIAGVCIG TIARVRDDSF GVASYGYTIM AVSLLCQLAS LRSFSPEKLQ YWRERQSGMS SLAYFLARDT IDHFNTAVKP IIFLSTFYFF
801: NNPRSTLRDN YLVLLALIYC VTGVGYTFAI WFELGLAQLS SAIVPVVLVL VGTKPDLPRV IRELCYTKWA LQAFIIAGAK EYSGVWLITR CGALLQGGYD
901: INEFNLCITI IMLHGVLFRL VAFLSMLKLK
0001: MGRRNSYFPG NFVPLFFVFI VLILQQERVI CQEDRSLDNP AANRLYNQFV FDKISNLTEV FEDDIKRELG FCITNVKEDY NEAFNFSTKP DFLNACGKTT
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
Arabidopsis Description
ABCG28ABC transporter G family member 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF46]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.