CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048621_P001	Maize	plastid	86.78	69.31
HORVU6Hr1G027440.10	Barley	plastid	77.57	64.36
Os12t0411700-01	Rice	plastid	79.13	63.81
TraesCS6A01G140300.2	Wheat	plastid	77.91	63.19
TraesCS6B01G168800.2	Wheat	plastid	77.91	63.01
TraesCS6D01G128600.1	Wheat	plastid	77.39	62.68
TraesCS4A01G308200.1	Wheat	plastid	73.74	60.66
GSMUA_AchrUn_...	Banana	plasma membrane	58.96	57.07
GSMUA_Achr6P04180_001	Banana	plasma membrane	56.35	54.82
GSMUA_Achr10P...	Banana	plasma membrane	39.13	53.83
GSMUA_AchrUn_...	Banana	plasma membrane	53.91	52.9
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	48.0	52.08
KXG19944	Sorghum	plastid	62.96	49.73
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	54.43	48.53
KXG34927	Sorghum	plastid	58.43	48.07
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	54.09	47.92
PGSC0003DMT400043270	Potato	cytosol	53.74	47.39
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	59.3	46.46
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	54.78	45.45
KRH42130	Soybean	plasma membrane	50.43	45.24
KRH42128	Soybean	plasma membrane	48.52	44.78
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	52.7	44.69
KRH18182	Soybean	cytosol	52.52	44.67
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	50.78	44.31
KRH42133	Soybean	extracellular	53.22	44.03
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	52.35	43.69
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	18.26	43.21
KRH42131	Soybean	cytosol, nucleus, plasma membrane	52.35	43.06
KRH42124	Soybean	cytosol	49.22	41.86
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	48.87	40.96
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	31.3	40.91
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	48.35	38.94
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	45.22	37.79
KRH18188	Soybean	cytosol	39.65	35.91
OQU82009	Sorghum	mitochondrion	48.17	35.51
EER90467	Sorghum	cytosol, plasma membrane, plastid	34.78	27.7
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	10.26	23.14
OQU91719	Sorghum	plasma membrane	24.52	15.16
OQU76478	Sorghum	plasma membrane	8.87	13.42
KXG25878	Sorghum	plasma membrane	25.39	13.32
KXG31382	Sorghum	plasma membrane	24.87	12.95

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1Z5RK16	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
EnsemblPlants:OQU84078	ProteinID:OQU84078	ProteinID:OQU84078.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF295	SMART:SM00382	EnsemblPlantsGene:SORBI_3005G225800
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B8B99A9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:71239783..71245313

Molecular Weight (calculated)

63492.6 Da

IEP (calculated)

8.806

GRAVY (calculated)

0.136

Length

575 amino acids

Sequence
(BLAST)

001: AFLTWEDVRV TVAGGGGPRG APDVRILDGI SGHARPGEVV AIMGPSGGGK TTLLDTLAGA YVCHRPAIIS LFHSKGTLIN HEINEFKGRL GPGMNKKGLI
101: LINGRQEKLA YGTSAYVTQD NVLMSTLSVR EAVYYSAQLQ LPDTMPLPEK RAHAERVIRE LGLGDAMDTR VGGRITKGIS GGQRKRLSIC IEMLTRPRLL
201: FLDEPTSGLD SAASYHVMSH IARVAARDDM TVVAAVHQPS GDVFELFHGL CLLAAGRTVF FGTISDATEF FTLNGFPCPH LRSPSDHFLR TINKDFDEET
301: VESSKTQRKT AAEAIEILAT AYRSSDYIEK TTNQIVEMKN MDGASFRRRE QASFATKLLV LTRRSFLNMH RDIGYYWMRL GIYMGIGVCL GTIFYQVGYS
401: YSSIQSRCSV IMYTVALLTF MSIGGFPSFV EDVKVFRKER LSGHYGVSEF VISNTLSATP YLSVIAVLPG AMLYYLTGLT KGVDHFIYFV IVVCLCCLLV
501: ESMMMVIAAI VPDFLMGIIV GAGVQGVMML NGGFFRLPNE LPKPVWKYPS YYISFHKYAV QGLYKNEFMG LSFPR

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.