CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES09373
EES16322
EES16732
KXG33111
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51500.1	EES01631	AT3G56800.1	15299147
AT1G51500.1	EES09201	AT3G56800.1	15299147
AT1G51500.1	EES16322	AT3G56800.1	15299147
AT1G51500.1	OQU78227	AT3G56800.1	15299147
AT1G51500.1	KXG33111	AT4G03560.1	15299147
AT3G21090.1	EES09373	AT4G09570.1	19130088
AT3G21090.1	EES16732	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010426_P001	Maize	plastid	96.08	95.8
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	90.99	89.43
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	88.08	87.95
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	88.08	87.95
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	88.08	87.95
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	87.94	87.81
GSMUA_Achr4P00390_001	Banana	plasma membrane	59.59	66.24
VIT_06s0061g00230.t01	Wine grape	plasma membrane	59.74	66.08
PGSC0003DMT400077106	Potato	cytosol, peroxisome, plasma membrane	63.08	63.64
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	62.94	63.49
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	57.99	63.33
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	63.66	63.02
CDY43913	Canola	nucleus, peroxisome, plasma membrane	63.37	63.01
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	63.37	63.01
CDX87823	Canola	nucleus, peroxisome, plasma membrane	61.77	62.78
CDY06406	Canola	peroxisome	61.92	62.74
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	63.66	62.66
Bra031249.1-P	Field mustard	peroxisome	62.79	62.52
AT3G21090.1	Thale cress	cytosol, peroxisome, plasma membrane	62.79	62.52
AT1G51500.1	Thale cress	cytosol, peroxisome, plasma membrane	62.35	62.45
VIT_06s0061g00260.t01	Wine grape	cytosol	60.9	61.44
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	59.16	59.16
Bra018911.1-P	Field mustard	plastid	53.63	58.57
CDY49810	Canola	plasma membrane	53.63	58.57
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	58.87	58.53
CDY22844	Canola	plastid	53.2	58.1
AT1G51460.1	Thale cress	plasma membrane	55.96	56.78
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	56.69	56.69
CDY18337	Canola	plasma membrane	20.2	56.28
KRH66902	Soybean	cytosol	23.4	54.76
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.81	52.82
KRH66901	Soybean	plasma membrane	31.83	50.46
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	52.03	50.14
KRH66900	Soybean	plasma membrane	46.08	47.96
GSMUA_Achr4P00380_001	Banana	plastid	56.4	46.8
OQU82009	Sorghum	mitochondrion	52.33	46.15
OQU84078	Sorghum	cytosol, plasma membrane	37.79	45.22
KRH66903	Soybean	extracellular	8.14	44.09
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	43.31	40.6
KXG19944	Sorghum	plastid	41.42	39.15
KXG34927	Sorghum	plastid	39.53	38.91
EER90467	Sorghum	cytosol, plasma membrane, plastid	31.83	30.33
KRG95235	Soybean	plasma membrane	45.93	28.19
OQU76478	Sorghum	plasma membrane	9.16	16.58
OQU91719	Sorghum	plasma membrane	21.51	15.91
KXG25878	Sorghum	plasma membrane	22.67	14.23
KXG31382	Sorghum	plasma membrane	22.09	13.77

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8066626	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	UniProt:C5YV41	EnsemblPlants:EES19248	ProteinID:EES19248	ProteinID:EES19248.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF338	SMART:SM00382	EnsemblPlantsGene:SORBI_3009G083300	SUPFAM:SSF52540	unigene:Sbi.8098	TMHMM:TMhelix
UniParc:UPI0001A887C2	RefSeq:XP_002440818.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:12573404..12578912

Molecular Weight (calculated)

76505.6 Da

IEP (calculated)

9.566

GRAVY (calculated)

0.142

Length

688 amino acids

Sequence
(BLAST)

001: MDGGNGEAWR GAVSPAARYA ESGGASLTWE NLTAVLPGGG GRATKKLVQG LYGYAVPGRV VAIMGPSGSG KSTLLDSLSG RLARNVVLTG KVLLNGKKRR
101: LDYGIVAYVT QENVLLGTLT VRETVTYSAL LRLPSSMHKS EVRRIVDDTL DEMGLQECAD RHIGTWHLRG ISGGEKKRLS IALEILTRPR LLFLDEPTSG
201: LDSAAAFSVV QTLRQLAIDG GRTIISSVHQ PSSEVFALFD DLCLLSSGEC VYFGDAKLAT QFFAETGFPC PSRRNPSDHF LRCVNSDFDD VAATMKGSMK
301: LRQEADLDPL LKYSTSEIRE RLVDKYRISD YAMMVRSTIH EITKIEGVMV EVIRGSQASW FKQLRTLTSR SFTNMSRDLN YYWLRIIIYI VMAICLGTIY
401: YDVGTSYSAI QARASCGGFV SGFMTFMSIG GFPSFIEEMK VFTLERQNGH YGVAAYIISN FLSSMPFLLT VSWASASITY WMVKYRAGFS YFAFFALNLY
501: GGVSVIESLM MIISALVPNF LMGLILGAGV IGIMMLTSGF FRLLPELPKI FWKYPVSYIV YGSWGLKGGY KNDMLGLEFE PMVPGQPKIT GEYIITEMMG
601: LSLNHSKWLD LAMIFVLLFA YRLTFFIVLK LKEAAAPYIR VAYTRFTVKR LERRASFRKT LAMTSMSKRH NPPHPMAIQE GLNSPMPY

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.