Factsheet for Zm00001d010426_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plastid: 20089766
plastid: 22065420

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004812_P002
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d011595_P007
Zm00001d023560_P002
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51500.1	Zm00001d005003_P002	AT3G56800.1	15299147
AT1G51500.1	Zm00001d008278_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d010649_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d028948_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d038543_P004	AT3G56800.1	15299147
AT1G51500.1	Zm00001d038545_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d041430_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d043144_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d047597_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d052415_P001	AT3G56800.1	15299147
AT1G51500.1	Zm00001d011595_P007	AT4G03560.1	15299147
AT3G21090.1	Zm00001d004812_P002	AT4G09570.1	19130088
AT3G21090.1	Zm00001d023560_P002	AT4G09570.1	19130088
AT3G21090.1	Zm00001d053016_P002	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	95.8	96.08
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	91.88	90.57
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	87.68	87.81
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	87.68	87.81
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	87.68	87.81
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	87.54	87.66
VIT_06s0061g00230.t01	Wine grape	plasma membrane	60.14	66.72
GSMUA_Achr4P00390_001	Banana	plasma membrane	59.71	66.56
PGSC0003DMT400077106	Potato	cytosol, peroxisome, plasma membrane	63.19	63.93
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.04	63.78
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	64.06	63.6
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	64.06	63.23
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	57.68	63.17
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	63.33	63.15
CDY43913	Canola	nucleus, peroxisome, plasma membrane	63.33	63.15
CDX87823	Canola	nucleus, peroxisome, plasma membrane	61.88	63.07
CDY06406	Canola	peroxisome	61.59	62.59
AT1G51500.1	Thale cress	cytosol, peroxisome, plasma membrane	62.32	62.59
AT3G21090.1	Thale cress	cytosol, peroxisome, plasma membrane	62.61	62.52
Bra031249.1-P	Field mustard	peroxisome	62.46	62.37
VIT_06s0061g00260.t01	Wine grape	cytosol	61.01	61.73
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	58.84	59.01
CDY49810	Canola	plasma membrane	53.62	58.73
Bra018911.1-P	Field mustard	plastid	53.62	58.73
CDY22844	Canola	plastid	53.19	58.25
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	58.41	58.24
AT1G51460.1	Thale cress	plasma membrane	56.23	57.23
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	56.52	56.69
CDY18337	Canola	plasma membrane	20.29	56.68
KRH66902	Soybean	cytosol	23.04	54.08
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.94	53.09
KRH66901	Soybean	plasma membrane	32.03	50.92
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	51.88	50.42
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	52.61	50.35
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	52.46	49.18
KRH66900	Soybean	plasma membrane	45.94	47.96
GSMUA_Achr4P00380_001	Banana	plastid	56.67	47.17
KRH66903	Soybean	extracellular	8.12	44.09
Zm00001d020811_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	44.49	41.71
Zm00001d019398_P001	Maize	plastid	38.26	38.1
Zm00001d048621_P001	Maize	plastid	39.28	37.64
KRG95235	Soybean	plasma membrane	45.94	28.28
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	30.58	19.57
Zm00001d032855_P002	Maize	plasma membrane	22.03	17.21
Zm00001d046068_P001	Maize	plasma membrane	21.88	14.52
Zm00001d004335_P001	Maize	plasma membrane	22.61	14.26
Zm00001d025031_P001	Maize	plasma membrane	22.61	14.17
Zm00001d018500_P002	Maize	plasma membrane	22.17	13.76

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AQK94033.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:K7V410	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF338	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0002209271	EnsemblPlantsGene:Zm00001d010426	EnsemblPlants:Zm00001d010426_P001	EnsemblPlants:Zm00001d010426_T001	SEG:seg	:

Description

CER5

Coordinates

chr8:-:114527255..114533597

Molecular Weight (calculated)

76455.5 Da

IEP (calculated)

9.638

GRAVY (calculated)

0.149

Length

690 amino acids

Sequence
(BLAST)

001: MDGGSGGGEA WRGAVSPAAR YAESGGASLT WENLTAVLPG GGGRATKKLV QGLYGYAVPG RVVAIMGPSG SGKSTLLDSL SGRLARNVVL TGKVLLNGKK
101: RRLDYGIVAY VTQENVLLGT LTVRETVTYS ALLRLPSSTR KAEVRRIVDE TLDEMGLREC ADRHIGTWHL RGISGGEKKR LSIALEILTR PRLLFLDEPT
201: SGLDSAAAFS VVQTLRQLAV DGGRTVVSSV HQPSSEVFAL FDDLCLLSSG ECVYFGDAKL ATQFFAETGF PCPSRRNPSD HFLRCVNSDF DDVAATMKGS
301: MKLRAEAELD PLLKYSTSEI RERLVDKYRI SDYAMMVRST IHEITKIEGV MEDVIRGSQA SWLKQLRTLT SRSFTNMSRD LNYYWLRIII YIVMAICLGT
401: IYYDVGTSYT AIQARASCGG FVSGFMTFMS IGGFPSFIEE MKVFTLERQN GHYGVAAYII SNFLSSMPFL LAVSWASASI TYWMVKFRPG FSYFAFFALN
501: LYGGVSVIES LMMIISALVP NFLMGLILGA GVIGIMMLTS GFFRLLPELP KIFWRYPVSY IVYGSWGLKG GYKNDLIGLE FEPMMPGQPK LTGEYIITEM
601: MGLSLNHSKW LDLAMIFVLL FAYRLTFFVV LKVKEAAAPY IRVAYTRFTV KRLERRASFR KTLAMASMSK RHNPPHPMAI QEGLSSPMPY

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.