Factsheet for Solyc11g065360.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0061g00260.t01	Wine grape	cytosol	64.24	64.81
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	62.94	63.49
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	61.77	61.77
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	61.77	61.42
AT1G51460.1	Thale cress	plasma membrane	59.16	60.03
CDY49810	Canola	plasma membrane	54.94	60.0
Bra018911.1-P	Field mustard	plastid	54.8	59.84
CDY22844	Canola	plastid	54.65	59.68
GSMUA_Achr4P00390_001	Banana	plasma membrane	51.45	57.19
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	56.69	56.69
Zm00001d010426_P001	Maize	plastid	56.69	56.52
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	56.25	56.17
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	56.25	56.17
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	56.25	56.17
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	56.98	56.0
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	55.81	55.73
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	46.95	48.94
Solyc03g019760.2.1	Tomato	nucleus	49.56	48.03
Solyc01g105400.2.1	Tomato	cytosol, plastid	8.14	47.86
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.55	46.71
Solyc01g105450.2.1	Tomato	plasma membrane	42.44	46.57
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	35.32	45.85
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	40.7	43.14
GSMUA_Achr4P00380_001	Banana	plastid	50.29	41.74
Solyc06g074970.1.1	Tomato	plastid	26.45	30.23
Solyc11g069710.1.1	Tomato	plastid	31.25	29.74
Solyc06g075020.2.1	Tomato	plasma membrane	22.67	14.26
Solyc11g069820.1.1	Tomato	plasma membrane	22.53	14.18
Solyc04g025170.2.1	Tomato	mitochondrion	20.35	13.73
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	21.51	13.57

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0009628	GO:GO:0009651	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	GO:GO:0080051
GO:GO:0080172	InterPro:IPR003439	UniProt:K4D9E9	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF186	SMART:SM00382	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc11g065360.1	EnsemblPlants:Solyc11g065360.1.1	TMHMM:TMhelix	UniParc:UPI000276996D	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:50797155..50808014

Molecular Weight (calculated)

76573.8 Da

IEP (calculated)

9.058

GRAVY (calculated)

0.164

Length

688 amino acids

Sequence
(BLAST)

001: MELEVARLGG DIEKGIESSG AYLIWEDVTV VLPKFGGGKG PTKRLLNGLS GYAEPGRIMA IMGPSGSGKS TLLDTLAGRL SANLVMTGNI LLNGKKRRLD
101: HGVVAYVTQE DILMGTLSVR ETIQYSAQLR LPSNMSTDEV NEIVNNVIIE MGLEDCAQNL IGNWHLRGIS GGEKKRLSIA LEIITQPQLL FLDEPTSGLD
201: SASAYFVVQL LKNIACGENG RTIICSIHQP SSEVFALFDD LFLLSSGETI YFGEAKLAVE FFGDSGFACP TRRNPADHFL RCINSDFDDV TATLIGSRRI
301: NDMKESSSSL IYLPTSECRV KLIQNYKYSN HKLRTKARVR QLANIKDIVF KESGGSQASW FKQLCTLIKR SLKNMSRDFG YYWLRIIVYI ILSISVGTVF
401: YDVGTGHNAV IARGACGGFI SGFMTFMSIG GFPSFIEEMK IFEKERKSRH YGVGVFILSN FISSFPFLVF MSMSSAAITY SLVKFHPGFF HFLYAAIVLL
501: SSITVVESCM MVVACFVPNF TMGLVVGAGI LGLMMASAGF FRLMPDLPKV FWRYPISYIN YMAWGLQGAY KNDLIGLEFD PVMPGEQMKK KMKGEEIISS
601: VLGFSIKHSK WCDLGVVIAI LISYRLLFYI ILKLKEKALP ILHTLYTQTT LQHLSKRPSF RITPPFPSKR YNHIHSLSSQ QHLDSPLH

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.