CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	95.78	95.23
VIT_06s0061g00260.t01	Wine grape	cytosol	70.06	70.67
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	68.6	67.91
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	68.02	66.95
Bra018911.1-P	Field mustard	plastid	58.28	63.65
CDY22844	Canola	plastid	58.14	63.49
CDY49810	Canola	plasma membrane	58.14	63.49
AT1G51460.1	Thale cress	plasma membrane	62.35	63.27
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	61.77	61.77
GSMUA_Achr4P00390_001	Banana	plasma membrane	55.09	61.23
KRH66902	Soybean	cytosol	25.58	59.86
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	59.59	59.51
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	59.16	59.16
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	59.16	59.07
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	59.16	59.07
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	59.16	59.07
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	60.03	59.0
Zm00001d010426_P001	Maize	plastid	59.01	58.84
KRH66901	Soybean	plasma membrane	33.14	52.53
KRH62969	Soybean	plasma membrane	7.85	51.92
KRH66900	Soybean	plasma membrane	49.13	51.13
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	51.6	50.21
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	51.45	50.14
KRH66903	Soybean	extracellular	8.87	48.03
GSMUA_Achr4P00380_001	Banana	plastid	54.36	45.11
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	28.34	44.32
KRH42130	Soybean	plasma membrane	41.28	44.31
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	42.88	43.51
KRH18182	Soybean	cytosol	42.44	43.2
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	43.02	42.71
KRH42133	Soybean	extracellular	43.02	42.59
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	42.01	41.94
KRH42128	Soybean	plasma membrane	37.79	41.73
KRH42131	Soybean	cytosol, nucleus, plasma membrane	42.3	41.63
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	38.95	40.67
KRH42124	Soybean	cytosol	37.35	38.02
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	36.92	37.03
KRH18188	Soybean	cytosol	32.85	35.59
KRH22852	Soybean	cytosol, plastid	31.25	29.7
KRG95235	Soybean	plasma membrane	47.97	29.44
KRH26514	Soybean	plasma membrane, plastid	30.96	29.42
KRG89865	Soybean	plastid	20.93	29.39
KRH32536	Soybean	plasma membrane	23.55	14.74
KRH25067	Soybean	plasma membrane	23.26	14.67
KRH30616	Soybean	plasma membrane	23.26	14.57
KRH19928	Soybean	plasma membrane	23.11	14.47
KRG91932	Soybean	plasma membrane	22.53	13.9
KRH34842	Soybean	plasma membrane	22.53	13.89
KRH71703	Soybean	plasma membrane	21.95	13.57

Protein Annotations

EntrezGene:100788651	MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02007169	EnsemblPlantsGene:GLYMA_12G020300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	UniProt:I1LPA9	InterPro:IPR003439	EnsemblPlants:KRH24072
ProteinID:KRH24072	ProteinID:KRH24072.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF186	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000233D309	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:1432397..1439459

Molecular Weight (calculated)

76874.7 Da

IEP (calculated)

9.069

GRAVY (calculated)

0.083

Length

688 amino acids

Sequence
(BLAST)

001: MEIEQATTNE KGVTDYGDAE MISDNNKRGM YLVWEDLTVV VPNFGNGHTR RLLDGLSGFA EPNRIMAIMG PSGSGKSTLL DALAGRLSRN VIMSGNVLLN
101: GKKRRLDYGV VAYVTQEDIV LGTLTVRETI SYSANLRLPS SMTKEEVNGI IEGTIMEMGL QDCGDRLIGN WHLRGISGGE KKRLSIALEI LTRPSLLFLD
201: EPTSGLDSAS AYFVAQTLRN LGHDGKTVIS SIHQPSSEVF ALFDDLFLLS GGQTIYFGPA KKAVEFFAKA GFPCPSRRNP SDHFLRCINS DFDAVTTTMM
301: ACQRVHEEMS ITTGSLSTAA IKATLIEKYR WSEHATTARA RIKEISSIEG HEFESKSNCE AKWWKQLSTL TRRSFVNMSR DVGYYWIRIT IYVALSLSVG
401: TIFYEVGSSY RAIFARGACG AFISGFMTFM SIGGFPSFIE EMKVFYKERL NGYYGVGVYI LSNFLSSFPF VAVMSIATGT ITYYMVRFRT EFSHYVYICL
501: DLIGCIAVVE SSMMIIASLV PNFLMGLIIG AGYIGVMMMT AGYFRQIPDL PKIFWRYPIS YINYGAWGLQ GAFKNDMIGM EFDPLEPGGT KLKGEIILKT
601: MLGIRVEISK WWDLAAVMII LVLLRVLFFV ILKFKERAAP FLYSIYARQT LQRIKKRPSF RKGPSFPSKP HQSLHPLSSQ EGLNSPIH

Best Arabidopsis Sequence Match ( AT1G51460.1 )
(BLAST)

001: MTTPEGAMYV AWEDLTVVIP NFGEGATKRL LNGVNGCGEP NRILAIMGPS GSGKSTLLDA LAGRLAGNVV MSGKVLVNGK KRRLDFGAAA YVTQEDVLLG
101: TLTVRESISY SAHLRLPSKL TREEISDIVE ATITDMGLEE CSDRTIGNWH LRGISGGEKK RLSIALEVLT KPSLLFLDEP TSGLDSASAF FVVQILRNIA
201: SSGKTVVSSI HQPSGEVFAL FDDLLLLSGG ETVYFGEAES ATKFFGEAGF PCPSRRNPSD HFLRCVNSDF DNVTAALVES RRINDSSFSL HQLHETTNTL
301: DPLDDIPTAE IRTTLVRKFK CSLYAAASRA RIQEIASIVG IVTERKKGSQ TNWWKQLRIL TQRSFINMSR DLGYYWMRIA VYIVLSICVG SIFFNVGRNH
401: TNVMSTAACG GFMAGFMTFM SIGGFQSFIE EMKVFSRERL NGHYGVAVYT VSNLLSSLPF IILMCLSTSS ITIYMVRFQS GGSHFFYNCL DLICAITTVE
501: SCMMMIASVV PNFLMGVMLG AGYIGIMVLS AGFFRFFPDL PMVFWRYPVS YINYGAWALQ GAYKNEMIGV EYDSPLPLVP KMKGELILQT VLGINPESSK
601: WLDLAVVMMI LIGYRIAFFA ILKFREKVFP VIHMLYTKRT LSHIQKRPSF RRMTPFPSRR YPVHHALSSQ EGLNSPLH

Arabidopsis Description

ABCG13ABC transporter G family member 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.