CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30512	Canola	cytosol	61.84	73.37
Solyc06g074970.1.1	Tomato	plastid	80.2	65.28
KRH22852	Soybean	cytosol, plastid	94.08	63.67
KRH26514	Soybean	plasma membrane, plastid	94.08	63.67
VIT_06s0061g00350.t01	Wine grape	plastid	86.73	58.86
Solyc11g069710.1.1	Tomato	plastid	85.92	58.23
PGSC0003DMT400050589	Potato	plastid	85.51	57.95
AT2G28070.1	Thale cress	plastid	82.24	55.21
Bra011981.1-P	Field mustard	plastid	81.63	54.64
CDX77150	Canola	plastid	81.22	54.52
PGSC0003DMT400031312	Potato	plastid	80.2	54.36
Bra034385.1-P	Field mustard	plastid	74.9	53.27
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	76.12	51.1
CDX71393	Canola	plastid	81.63	50.13
CDY04533	Canola	mitochondrion	81.84	49.14
EER90467	Sorghum	cytosol, plasma membrane, plastid	67.76	45.98
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	66.73	45.23
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	66.53	45.03
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	66.73	44.98
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	64.08	43.67
KRH66902	Soybean	cytosol	18.78	31.29
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	66.73	30.33
KRH18188	Soybean	cytosol	31.63	24.41
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	32.86	22.8
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	32.86	22.77
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	31.02	22.42
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	31.63	22.37
KRH42133	Soybean	extracellular	31.63	22.3
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	31.43	22.16
KRH42131	Soybean	cytosol, nucleus, plasma membrane	31.43	22.03
KRH18182	Soybean	cytosol	30.2	21.89
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	31.22	21.89
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	30.2	21.48
KRH42130	Soybean	plasma membrane	27.96	21.37
KRH66901	Soybean	plasma membrane	18.78	21.2
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	29.59	20.95
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	29.39	20.93
KRH42128	Soybean	plasma membrane	26.53	20.87
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	27.76	20.64
KRH42124	Soybean	cytosol	28.16	20.41
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	28.37	20.26
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	17.96	20.0
KRH66900	Soybean	plasma membrane	25.51	18.91
KRG95235	Soybean	plasma membrane	25.92	11.33
KRH25067	Soybean	plasma membrane	24.9	11.18
KRH30616	Soybean	plasma membrane	24.69	11.02
KRH19928	Soybean	plasma membrane	23.67	10.55
KRH32536	Soybean	plasma membrane	23.27	10.37
KRG91932	Soybean	plasma membrane	23.47	10.31
KRH34842	Soybean	plasma membrane	23.27	10.22
KRH71703	Soybean	plasma membrane	22.45	9.88
KRH62969	Soybean	plasma membrane	0.82	3.85
KRH66903	Soybean	extracellular	0.61	2.36

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0E731	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	EMBL:ACUP02012299
EnsemblPlantsGene:GLYMA_20G052300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	InterPro:IPR003439	EnsemblPlants:KRG89865	ProteinID:KRG89865
ProteinID:KRG89865.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0006EDE3DA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:11821829..11824993

Molecular Weight (calculated)

54052.7 Da

IEP (calculated)

8.924

GRAVY (calculated)

0.109

Length

490 amino acids

Sequence
(BLAST)

001: MEEIQSQSDH YRSSSLSASS PASRVPSSNF FYLRKPGSLM QPISFEDSPE WDDTDIDVRV EEGGDSINVA STLASPSLSK LNSRSLQSPY LPEGAVIPRK
101: IAGASVAWKD LTVTIKGKRK YSDKVIKSST GYALPGTVTV IMGPAKSEKS TLLQAIAGRL HPSTRMYGEV FVNGAKSQMP YGSYVYVERE TTLIGSLTVR
201: EFLYYSALLQ LPGFFCQKKS VVEDAIHAMS LGDHANKLIG GHCYMKGLPS GERRLVSIAR ELVMRPRILF IDEPLYHLNS VSALLMMVTL KRLASTGYTL
301: ILTIYQSSTE VFGLFYHICL LSNGNTLFFG ETLACLQHFS NAGFPCPIMQ NFDRIIAMCK NWQDDNGDFS SVNMDTAVAI RTLEATYKSS ADAAAVETMI
401: LKLAEKEGPV LKSKAVLIWR SLLVVSREWK YCWLHLILYM LLTLCIGTVF SGLGHSLSSV VTRVAAIFVF ASFSSLLSIA RVPALKKEIK

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.