Factsheet for TraesCS5D01G551400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	97.1	96.7
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	95.58	95.71
EER90467	Sorghum	cytosol, plasma membrane, plastid	81.08	81.3
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	77.62	78.16
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	70.72	70.14
VIT_06s0061g00350.t01	Wine grape	plastid	67.27	67.45
KRG89865	Soybean	plastid	45.03	66.53
KRH22852	Soybean	cytosol, plastid	65.33	65.33
Solyc06g074970.1.1	Tomato	plastid	54.01	64.95
KRH26514	Soybean	plasma membrane, plastid	64.92	64.92
PGSC0003DMT400050589	Potato	plastid	63.95	64.04
Solyc11g069710.1.1	Tomato	plastid	63.81	63.9
AT2G28070.1	Thale cress	plastid	64.09	63.56
Bra011981.1-P	Field mustard	plastid	63.54	62.84
CDX77150	Canola	plastid	63.12	62.6
CDY30512	Canola	cytosol	35.64	62.47
PGSC0003DMT400031312	Potato	plastid	61.74	61.83
Bra034385.1-P	Field mustard	plastid	58.56	61.54
CDX71393	Canola	plastid	63.67	57.77
CDY04533	Canola	mitochondrion	63.81	56.62
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	79.28	53.25
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	32.6	32.96
TraesCS5D01G257000.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	33.01	32.61
TraesCS5D01G257100.2	Wheat	nucleus, peroxisome, plasma membrane, plastid	32.73	32.16
TraesCS2D01G110800.1	Wheat	plastid	30.11	32.15
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	32.46	32.06
TraesCS2D01G110700.1	Wheat	plastid	28.73	31.0
TraesCS6D01G128600.1	Wheat	plastid	30.11	30.7
TraesCS2D01G370400.2	Wheat	plastid	32.04	29.9
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	28.18	29.61
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	29.01	29.17
TraesCS1D01G140400.1	Wheat	plasma membrane	18.37	12.98
TraesCS2D01G048800.1	Wheat	plasma membrane	18.65	12.48
TraesCS6D01G380300.1	Wheat	plasma membrane	18.37	11.09

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G551400	EnsemblPlants:TraesCS5D01G551400.1	TIGR:cd03213	SEG:seg

Description

No Description!

Coordinates

chr5D:+:557277627..557282221

Molecular Weight (calculated)

79539.7 Da

IEP (calculated)

8.933

GRAVY (calculated)

0.267

Length

724 amino acids

Sequence
(BLAST)

001: MEATSSDQYR SSSSSAGSPS APAGGAGRRY YFPRPGRPVS FEDSPDWGDD ITVDAAGAAH DSSSSSIHLA SASAASSAYP SPSPSLPGPS ASGSGFRERK
101: VAGAALVWKE LSVSVRDGRR PGRVVRGSSG YALPGTLTVV MGPARSGKST LLRAISGRLR GAERMYGEVF VNGVKSPLPY GSYGYVDRDD VLIESLTVRE
201: MLYYSALLQL PGVFSSKKSF VEDAIAAMSL GDYADKLIGG HCFTKRLPTG ERRRVSIARE LVMRPHVLFI DEPLYHLDSV SALLLMVTLK KLASTGCTVI
301: FTMYQSSTEV FGLFDRICLL SNGNTLFFGE TLACLQHFSN AGFPCPIMQS PSDHFLRAIN TDFDRIIAMC KNLQDDQGDF SSVSMDTAVA IRTLEATYKS
401: SAEAASVESM IAKLIEKEGP YLKSKGRARD AARIGILTWR SLLIMSRDWK YFWSRLVLYM LLALSIGTIF IDIGHSLSSV VVRISAMFVF VSFLILLSVC
501: GVPAHIDEIK IYSHEDSNRH SGTLVFLLGH FLASIPFLFL VSISSSLVFY FLIGLRNEFS FLMYFIITIF MCLLANEALM MIVAYIWLET YKCTLTLICL
601: YVIMMLVAGY FRIRDAIPAA VWDYPLSYIS FHTYAVQGLV ENEYVDTSFA VGATRTIPGV QAVRGSYGIS SSAGAKWMNL LVLLLMAIGY RVVLYVLLRL
701: DVRRHVRLGR RSCWPSIHTS AAPK

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.