Factsheet for TraesCS1D01G161500.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	98.6	98.6
Os10t0494300-01	Rice	extracellular, plasma membrane	88.13	87.28
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	86.73	86.97
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	84.5	85.21
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	85.47	85.0
TraesCS1A01G164500.1	Wheat	cytosol	80.45	83.97
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	80.03	82.68
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	80.45	81.47
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	83.66	81.39
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	80.03	81.16
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	75.42	80.96
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	78.21	79.43
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	77.09	78.08
Solyc03g019760.2.1	Tomato	nucleus	77.37	78.03
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	75.84	77.24
CDY26211	Canola	cytosol, peroxisome, plasma membrane	71.51	75.74
CDY19179	Canola	cytosol, peroxisome, plasma membrane	71.37	75.59
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.88	75.46
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.23	75.44
CDX96749	Canola	cytosol, peroxisome, plasma membrane	70.81	74.89
CDX83888	Canola	cytosol, peroxisome, plasma membrane	70.81	74.67
PGSC0003DMT400069344	Potato	plasma membrane	29.05	73.76
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	66.34	71.97
TraesCS2D01G370400.2	Wheat	plastid	77.23	71.26
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	63.41	69.21
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.6	67.69
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	48.74	50.65
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	46.37	45.29
TraesCS5D01G257000.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	46.09	45.02
TraesCS5D01G257100.2	Wheat	nucleus, peroxisome, plasma membrane, plastid	46.23	44.91
TraesCS6D01G128600.1	Wheat	plastid	42.88	43.24
TraesCS2D01G110700.1	Wheat	plastid	40.5	43.22
TraesCS2D01G110800.1	Wheat	plastid	40.92	43.22
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	32.96	32.6
TraesCS1D01G140400.1	Wheat	plasma membrane	21.79	15.22
TraesCS6D01G380300.1	Wheat	plasma membrane	24.58	14.68
TraesCS2D01G048800.1	Wheat	plasma membrane	22.07	14.6

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR000048
InterPro:IPR003439	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50096	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G161500	EnsemblPlants:TraesCS1D01G161500.2	TIGR:cd03213	SEG:seg	:

Description

No Description!

Coordinates

chr1D:-:228440083..228444205

Molecular Weight (calculated)

79265.5 Da

IEP (calculated)

8.554

GRAVY (calculated)

0.175

Length

716 amino acids

Sequence
(BLAST)

001: MKKARAGTAK EAAAVGQVKA ELEDVGKAAG RAVAVAAAPA LSPLSETLWR EKAAVEFLGD VSARLAWRDL TVTVALGSGD TQTVLQALTG YAEPGTITAL
101: MGPSGSGKST LLDALAGRLA ANAFLSGTIL LNGRKANLSF GAAAYVTQDD NLIGTLTVRE TISYSARLRL PDNMPMEEKR ALVEGTIVEM GLQDCADTVI
201: GNWHLRGVSG GEKRRVSIAL EILMRPRLLF LDEPTSGLDS ASAFFVTQTL RGLARDGRTV IASIHQPSSE VFELFDRLYL LSGGKTVYFG QASEACEFFA
301: QAGFPCPPLR NPSDHFLRCI NADFDKVKAT LKGSMKMRFE RSDDPLEHIT TSDAIRRLFS YYQHSQHYLT ARQKVDEMAR VKGTVLDAGG SQASFGMQAC
401: TLTKRSFVNM SRDFGYYWLR LVIYIVVTVC IGSIYLNVGT KYNSILARGA CASFIFGFVT FMSIGGFPSF VEDMKVFQRE RLNGHYGVLA FVISNTLSAM
501: PFLILITFLS GTLCYFMVRL HPGFMHYVFF VLCLYASVTV VESLMMAIAS IIPNFLMGII IGAGIQGIFM LVSGYFRLPH DIPKPFWRYP MSYISFHYWA
601: LQGQYQNDLV GLVFDNQDEE LPKIPGEYIL ENVFQIDVSR SKWLDLSVLF GMIVIYRLLF FAMIKVSEDV TPWVRGYIAR RRVQHKRREA ELAMVRTPSL
701: RGYVVDAAPE LPADHP

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.