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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
 extracellular: 25047395
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G161500.2 Wheat cytosol, peroxisome, plasma membrane 87.28 88.13
TraesCS1B01G181300.2 Wheat cytosol, peroxisome, plasma membrane 86.86 87.71
KXG38261 Sorghum cytosol, peroxisome, plasma membrane 84.65 85.71
Zm00001d013960_P001 Maize cytosol, peroxisome, plasma membrane 83.26 84.79
GSMUA_Achr5P10800_001 Banana cytosol, peroxisome, plasma membrane 79.25 82.68
GSMUA_Achr5P19820_001 Banana cytosol, peroxisome, plasma membrane 74.55 80.81
KRH38814 Soybean cytosol, peroxisome, plasma membrane 78.7 80.48
Zm00001d032601_P002 Maize cytosol, peroxisome, plasma membrane 81.88 80.43
KRH09311 Soybean cytosol, peroxisome, plasma membrane 78.42 80.31
VIT_16s0039g00010.t01 Wine grape cytosol, peroxisome, plasma membrane 78.28 80.28
Solyc03g019760.2.1 Tomato nucleus 77.04 78.45
PGSC0003DMT400039496 Potato cytosol, peroxisome, plasma membrane 76.49 78.22
Os04t0528300-01 Rice plasma membrane 76.9 78.2
TraesCS1A01G164500.1 Wheat cytosol 74.0 77.99
AT1G17840.1 Thale cress cytosol, peroxisome, plasma membrane 75.52 77.67
TraesCS1D01G150800.1 Wheat cytosol, peroxisome, plasma membrane 77.04 77.36
CDY26211 Canola cytosol, peroxisome, plasma membrane 71.65 76.63
CDY19179 Canola cytosol, peroxisome, plasma membrane 71.51 76.48
Bra025944.1-P Field mustard cytosol, peroxisome, plasma membrane 71.37 76.33
Bra016584.1-P Field mustard cytosol, peroxisome, plasma membrane 73.44 75.75
CDX96749 Canola cytosol, peroxisome, plasma membrane 70.54 75.33
CDX83888 Canola cytosol, peroxisome, plasma membrane 70.68 75.26
PGSC0003DMT400069344 Potato plasma membrane 28.63 73.4
Solyc06g072090.1.1 Tomato cytosol, plasma membrane, plastid 64.73 70.91
PGSC0003DMT400069337 Potato cytosol, peroxisome, plastid 62.52 68.9
Solyc06g072100.1.1 Tomato cytosol, peroxisome, plasma membrane 66.53 67.27
Os05t0222200-01 Rice nucleus, peroxisome, plasma membrane 50.48 52.14
Os10t0163290-00 Rice cytosol, endoplasmic reticulum, extracellular 18.12 51.57
Os12t0409700-00 Rice cytosol, peroxisome, plasma membrane 28.08 47.76
Os09t0472200-00 Rice plasma membrane 44.26 44.69
Os09t0472100-01 Rice plasma membrane 44.54 44.66
Os12t0411700-01 Rice plastid 43.02 43.62
Os07t0288700-02 Rice plastid 42.74 42.39
Os09t0250800-00 Rice mitochondrion 42.32 41.35
Os09t0125900-01 Rice plastid 28.08 38.67
Os03t0859500-01 Rice cytosol, mitochondrion, plasma membrane, plastid 32.09 32.27
Os10t0442900-01 Rice plasma membrane 22.55 18.17
Os04t0194500-01 Rice plasma membrane 23.51 15.96
Os11t0416900-01 Rice plasma membrane 23.93 15.71
Os06t0731200-01 Rice plasma membrane 21.44 15.58
Protein Annotations
MapMan:21.9.4.1MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:4348993InterPro:AAA+_ATPaseProteinID:AAM92819.1
ProteinID:AAP54419.1InterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:BAF26858.1ProteinID:BAT11459.1
GO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0006950GO:GO:0007275GO:GO:0008150GO:GO:0009611GO:GO:0009628GO:GO:0009651
GO:GO:0009653GO:GO:0009719GO:GO:0009737GO:GO:0009790GO:GO:0009791GO:GO:0009897
GO:GO:0010222GO:GO:0010588GO:GO:0015245GO:GO:0015908GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0042803GO:GO:0055085GO:GO:0080051
InterPro:IPR003439EnsemblPlantsGene:Os10g0494300EnsemblPlants:Os10t0494300-01InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF271UniProt:Q8LNT5SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00000A2276RefSeq:XP_015613575.1SEG:seg:
Description
ABC TRANSPORTER G FAMILY MEMBER 26ATP binding cassette G transporter, Regulation of male reproduction, Anther cuticle development (Os10t0494300-01)
Coordinates
chr10:+:18784891..18790563
Molecular Weight (calculated)
79210.4 Da
IEP (calculated)
9.098
GRAVY (calculated)
0.197
Length
723 amino acids
Sequence
(BLAST)
001: MKKQGGGGGV AAAAVAAAGM VKAELEDVGI KAAGGAVAAL SPLSETLWRE KAAAEFLGDV SARLAWRDLT VTVVLGGGGG GGGGGTTQDV LQGLTGHAEP
101: GTITALMGPS GSGKSTLLDA LAGRLAANAF LDGTVLLNGR KANLSFGAAA YVTQDDNLIG TLTVRETISY SARLRLPDKM PMEEKRALVE GTIVEMGLQD
201: CADTVVGNWH LRGISGGEKR RVSIALEILM RPRLLFLDEP TSGLDSASAF FVTQTLRGLA RDGRTVIASI HQPSSEVFEL FDRLYLLSGG KTVYFGLASE
301: ACQFFAQAGF PCPPLRNPSD HFLRCINADF DKVKATLKGS MKRRFERSDD PLDRIMTSEA IRRLITYYKN SQYYFAAQQK VNEMARVKGT VLDAGGSQAS
401: FWMQAFTLTK RSFINMSRDF GYYWLRLIIY IVVTVCIGTI YLNVGTRYSS ILARGACASF VFGFVTFMSI GGFPSFVEDM KVFQRERLNG HYGVLAFVIS
501: NTISAMPFLI LITFISGTMC YFMVRLHPGF THYLFFVLCL YASVTVVESL MMAIASVIPN FLMGIIIGAG IQGIFMLVSG YFRLPHDIPK PFWRYPMSYI
601: SFHYWALQGQ YQNDLKGLVF DNQDDELPKI PGEYILENVF QIDVSRSKWL DLAVLFSMIF IYRLLFFAMI KVSEDVTPWV RGYVARRRVQ GKGARGRGAD
701: LSAARSPSLR AYVVDAADDL PPA
Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)
001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW
Arabidopsis Description
ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.