Factsheet for Os12t0409700-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0163290-00	Rice	cytosol, endoplasmic reticulum, extracellular	29.41	49.21
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	27.06	47.33
Os12t0411700-01	Rice	plastid	77.18	46.0
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	56.24	45.09
GSMUA_AchrUn_...	Banana	plasma membrane	62.82	44.95
GSMUA_Achr10P...	Banana	plasma membrane	42.59	43.3
GSMUA_Achr6P04180_001	Banana	plasma membrane	58.12	41.79
GSMUA_AchrUn_...	Banana	plasma membrane	52.47	38.05
Os09t0472100-01	Rice	plasma membrane	61.41	36.2
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	54.12	35.66
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	54.12	35.44
Os09t0472200-00	Rice	plasma membrane	59.29	35.2
Os09t0250800-00	Rice	mitochondrion	60.0	34.46
KRH42128	Soybean	plasma membrane	49.41	33.71
Os07t0288700-02	Rice	plastid	57.65	33.61
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	52.0	33.54
KRH42130	Soybean	plasma membrane	50.35	33.39
KRH18182	Soybean	cytosol	52.71	33.14
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	52.24	32.74
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	52.71	32.51
KRH42131	Soybean	cytosol, nucleus, plasma membrane	53.18	32.33
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	52.24	32.03
KRH42124	Soybean	cytosol	50.12	31.51
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.24	31.14
KRH42133	Soybean	extracellular	50.82	31.08
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	50.12	31.05
PGSC0003DMT400043270	Potato	cytosol	44.94	29.29
Os10t0494300-01	Rice	extracellular, plasma membrane	47.76	28.08
Os04t0528300-01	Rice	plasma membrane	46.59	27.85
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	40.47	24.57
Os09t0125900-01	Rice	plastid	29.88	24.19
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	35.53	21.0
KRH18188	Soybean	cytosol	31.29	20.94
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	12.47	20.78
Os10t0442900-01	Rice	plasma membrane	22.82	10.81
Os04t0194500-01	Rice	plasma membrane	22.82	9.11
Os11t0416900-01	Rice	plasma membrane	23.53	9.08
Os06t0731200-01	Rice	plasma membrane	20.71	8.84

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0P0Y9Q9	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	ProteinID:BAT16856.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	EnsemblPlantsGene:Os12g0409700
EnsemblPlants:Os12t0409700-00	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PANTHER:PTHR19241	PANTHER:PTHR19241:SF295
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000393B3CA	:	:	:

Description

ABC TRANSPORTER G FAMILY MEMBER 29Hypothetical conserved gene. (Os12t0409700-00)

Coordinates

chr12:-:12433463..12439186

Molecular Weight (calculated)

47607.5 Da

IEP (calculated)

8.067

GRAVY (calculated)

0.212

Length

425 amino acids

Sequence
(BLAST)

001: MSTLSVREAI YYSAHLQLPD TMLVSEKRTH AEHVIQEMGL DDIMDTRIGG RITKGISGGQ RKRVSICVEM LTRPRLLFLD EPTSGLDSAA SYHVMSHITS
101: VAAGEGMTVV AAVHQPGEVF ELFHSLCLLA HGRTVFLGTV SDATEFFNLN GFPCPCLRNP SEHFLGTINK DFDEEIVEDS RYRRKTAAKA IDTLTNAYQS
201: SAYSEKTTNQ IIQMKEMVFR RERLSGHYGV TEFVISNTLS ATPYLAVMII IPGAILYYLT GLTRGGSNIA YFVVTLYMCI VLVESIMMVI AAVVPDFLMG
301: IVVGSGVQAL MMTNGGFFRL PNQLPKPVWK YPCYYISFHK YAVQGFYKNE FVGQTFASDQ LIMANATITG HQVLEALQVE MWYSKWVNLA ILFGMAVIYR
401: MMFFAIVKVA EGIRPKMRRM KCSLI

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.