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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • plasma membrane 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os09t0472100-01 Rice plasma membrane 86.31 85.71
TraesCS5B01G247800.1 Wheat plasma membrane, plastid 79.47 77.63
TraesCS5D01G257000.1 Wheat nucleus, peroxisome, plasma membrane, plastid 79.33 77.49
TraesCS5B01G248000.1 Wheat plasma membrane, plastid 78.91 77.4
KXG35822 Sorghum mitochondrion, nucleus, peroxisome, plasma membrane 79.33 77.38
TraesCS5D01G257400.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 79.19 77.35
TraesCS5A01G249900.1 Wheat cytosol, peroxisome, plasma membrane, plastid 79.19 77.35
TraesCS5B01G247700.1 Wheat nucleus, peroxisome, plasma membrane, plastid 78.91 77.08
TraesCS5D01G257100.2 Wheat nucleus, peroxisome, plasma membrane, plastid 79.19 76.93
Zm00001d020811_P001 Maize nucleus, peroxisome, plasma membrane, plastid 78.63 76.49
HORVU5Hr1G070400.3 Barley cytosol, peroxisome 78.49 74.44
GSMUA_AchrUn_... Banana plasma membrane 61.59 74.24
GSMUA_Achr6P04180_001 Banana plasma membrane 59.78 72.42
GSMUA_Achr10P... Banana plasma membrane 42.18 72.25
VIT_00s0822g00010.t01 Wine grape cytosol, peroxisome, plasma membrane 24.02 70.78
Solyc05g051530.2.1 Tomato cytosol, peroxisome, plasma membrane 50.42 68.11
GSMUA_AchrUn_... Banana plasma membrane 55.59 67.92
Os10t0163290-00 Rice cytosol, endoplasmic reticulum, extracellular 22.91 64.57
PGSC0003DMT400041814 Potato cytosol, peroxisome, plasma membrane 55.31 61.4
Solyc11g009100.1.1 Tomato cytosol, peroxisome, plasma membrane 55.45 61.17
PGSC0003DMT400043270 Potato cytosol 54.61 59.97
Os12t0409700-00 Rice cytosol, peroxisome, plasma membrane 35.2 59.29
KRH42130 Soybean plasma membrane 52.09 58.19
KRH18202 Soybean cytosol, nucleus, plasma membrane, plastid 55.03 56.85
KRH18189 Soybean cytosol, peroxisome, plasma membrane 54.61 56.75
KRH42131 Soybean cytosol, nucleus, plasma membrane 55.17 56.51
KRH42133 Soybean extracellular 54.47 56.12
KRH18184 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 34.36 55.91
KRH18182 Soybean cytosol 52.51 55.62
Os07t0288700-02 Rice plastid 56.56 55.56
KRH42129 Soybean cytosol, peroxisome, plasma membrane 52.09 55.01
Os12t0411700-01 Rice plastid 54.75 54.98
Os09t0250800-00 Rice mitochondrion 56.7 54.86
KRH18205 Soybean cytosol, peroxisome, plasma membrane 47.77 51.9
Os09t0125900-01 Rice plastid 37.71 51.43
KRH42124 Soybean cytosol 48.18 51.04
KRH42128 Soybean plasma membrane 43.99 50.56
KRH18181 Soybean cytosol, peroxisome, plasma membrane 47.35 49.42
Os04t0528300-01 Rice plasma membrane 44.27 44.59
Os10t0494300-01 Rice extracellular, plasma membrane 44.69 44.26
KRH18188 Soybean cytosol 37.43 42.2
Os05t0222200-01 Rice nucleus, peroxisome, plasma membrane 41.2 42.14
Os03t0859500-01 Rice cytosol, mitochondrion, plasma membrane, plastid 32.82 32.68
AT3G21080.1 Thale cress cytosol, peroxisome, plasma membrane 11.45 32.16
Os10t0442900-01 Rice plasma membrane 21.23 16.95
Os11t0416900-01 Rice plasma membrane 24.72 16.08
Os06t0731200-01 Rice plasma membrane 22.07 15.88
Os04t0194500-01 Rice plasma membrane 22.63 15.21
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A0P0XN42InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSProteinID:BAT08571.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439EnsemblPlantsGene:Os09g0472200EnsemblPlants:Os09t0472200-00InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF301SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000393AA1D:::
Description
ABC TRANSPORTER G FAMILY MEMBER 23Similar to white-brown-complex ABC transporter family. (Os09t0472200-00)
Coordinates
chr9:+:18044671..18050946
Molecular Weight (calculated)
78630.1 Da
IEP (calculated)
8.830
GRAVY (calculated)
0.013
Length
716 amino acids
Sequence
(BLAST)
001: MASEQQPAAV PRWTPSPRRR QDDDEADRKG AAGMVSDLGA SMRGTEGFPF GSGRSFQPPP FLPAAEAEQP SPEISVERND ENDRVAFVVA RETSSLRRPE
101: QGAVLAWEDL WVSTAGGSRR RVPILCGLNG YARPGEVLAI MGPSGCGKST LLDSLAGRLG SSVSQKGDIL INGRRQKLAF GTSAYVTQDD VLMNTLTVRE
201: AVRYSAQLQL PSGMSAAAKR ERAEETLREM GLEGAADTRI GGWAHKGISG GQRRRVSICM EILTRPALLF LDEPTSGLDS AASYHVVSRI ARMARREGMT
301: VVAAVHQPST EVFGLFHGLC LLAYGKTVFF GPAADTAQFS ALSGFPCPSL MNPSDHFLRT INKDFDKDIE VGLDGKTMTT TQAIDTLVNS YKSSVHLAKE
401: GQLVKKERQP TFLTQSWVLT KRSFVNMYRD LGYYWLRFAI YVALCLCVGT IYYDVGHSYG SIQARGSMLM FVAAFLTFMA IGGFPSFVED MKIFGRERLN
501: GHYGVASFVI ANTLSSTPYL ALISVVPGAI AYYLTGLQSS GEHFGYFAAV LFTTMMVVEG LMMIVASAVP DFLMGIITGA GVQGVMMLNG GFFRLPNDLP
601: KPVWKYPMYY IAFHKYANQG FYKNEFLGLT FPKYNDQAGA GTVITGEEIL TNYWQVQLGY SKWADLAILI GMVVLYRVLF FVIVKLIEKM KPMVQRLRFR
701: SDMPSVQVTE QGFGSS
Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)
001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR
Arabidopsis Description
ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.