Factsheet for TraesCS5B01G247700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G247800.1	Wheat	plasma membrane, plastid	96.18	96.18
TraesCS5B01G248000.1	Wheat	plasma membrane, plastid	95.36	95.75
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	95.5	95.5
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	93.59	90.86
Os09t0472100-01	Rice	plasma membrane	79.54	80.86
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	80.76	80.65
Zm00001d020811_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	79.54	79.21
Os09t0472200-00	Rice	plasma membrane	77.08	78.91
GSMUA_Achr10P...	Banana	plasma membrane	43.25	75.84
GSMUA_AchrUn_...	Banana	plasma membrane	61.39	75.76
GSMUA_Achr6P04180_001	Banana	plasma membrane	58.53	72.59
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.74	71.6
GSMUA_AchrUn_...	Banana	plasma membrane	55.53	69.45
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	49.93	69.06
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	54.98	62.48
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	54.98	62.1
PGSC0003DMT400043270	Potato	cytosol	53.89	60.58
TraesCS7B01G490800.1	Wheat	peroxisome	47.89	60.0
TraesCS2B01G128800.1	Wheat	plasma membrane	38.47	59.24
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	55.25	58.44
KRH42130	Soybean	plasma membrane	51.02	58.35
TraesCS7B01G490700.1	Wheat	plastid	34.24	57.44
TraesCS2B01G128400.1	Wheat	plastid	52.93	57.4
KRH42133	Soybean	extracellular	53.75	56.69
KRH18182	Soybean	cytosol	52.11	56.51
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	52.93	56.31
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	51.71	55.9
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	33.42	55.68
KRH42131	Soybean	cytosol, nucleus, plasma membrane	53.07	55.65
TraesCS6B01G168800.2	Wheat	plastid	53.89	55.56
KRH42128	Soybean	plasma membrane	43.66	51.36
KRH42124	Soybean	cytosol	46.79	50.74
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	45.57	50.68
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	46.66	49.85
TraesCS2B01G128700.1	Wheat	plastid	42.02	49.52
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	45.16	46.23
KRH18188	Soybean	cytosol	37.65	43.46
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	40.25	42.82
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	10.91	31.37
TraesCS7B01G488900.1	Wheat	plasma membrane	24.01	16.59
TraesCS2B01G060900.1	Wheat	plasma membrane	23.19	15.7
TraesCS6B01G434900.1	Wheat	plasma membrane	24.01	15.58
TraesCS1B01G157900.1	Wheat	endoplasmic reticulum	16.64	15.35

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF301	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G247700	EnsemblPlants:TraesCS5B01G247700.1	TIGR:cd03213	SEG:seg

Description

No Description!

Coordinates

chr5B:+:429726320..429731333

Molecular Weight (calculated)

80235.4 Da

IEP (calculated)

8.840

GRAVY (calculated)

0.052

Length

733 amino acids

Sequence
(BLAST)

001: MASEQLLPAV PRWRPSPPRE QSRPGHAADD EGPSETASDV LGGSLRSTDG FPFGSGSSFP PPPFAPMPVT LPRSRTSSSL EISVENGAGA VPPVLRETSL
101: RRVDQGVVLS WEDLWVSAAG GKAGRVPILR GLNGYARPGE VLAIMGPSGC GKSTLLDALA GRLGSGVSQK GDILINGRRQ KLSYGTSAYV TQDDVLMTTL
201: TVREAVRYSA SLQLPSGMSA AAKRERAEET LREMGLEGAA DTRIGGWMHK GISGGQRRRV SICMEILTRP ALLFLDEPTS GLDSAASFHV VSRIARLARR
301: EGMTVVAAVH QPSTEVYGLF HGLCLLAYGK TVFFGPAAET NQFFALSGFP CPSLMNPSDH FLRTVNKDFD NDIEEGLGGK KTTTAENIDA LAVSYKSSMH
401: MDKVTRQIAN IRSTGGEVVK MEGQQPSFLM QSFVLTKRSF TNMYRDLGYY WLRFAIYIAL CLCCGTIFYD IGQDYGSIQA RGSMLMFVGA FLTFMAIGGF
501: PSFVEDMKIF GRERLNGHYG VSSFVIANTV SATPYLLLIS VVPGAMAYYL VGLQRSFDHF AYFALVLFMT MMLVEGLMMI VASAVPDFLM GIITGAGIQG
601: VMMLNGGFFR LPHDLPKPVW RYPMYYVAFH KYANQGFYKN EFLGLTFPNN QAGGATTITG DEILRQYWQV EMGYNKWVDL AVLFGMVILY RVLFLVIMKL
701: TEKVKPMVNG FSFRRTQPSV HIADQSFEAN GAK

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.