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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome
Any Predictor:cytosol, peroxisome
MultiLoc:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G249900.1 Wheat cytosol, peroxisome, plasma membrane, plastid 91.66 94.41
TraesCS5B01G247800.1 Wheat plasma membrane, plastid 91.13 93.86
TraesCS5D01G257400.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 90.86 93.59
TraesCS5D01G257000.1 Wheat nucleus, peroxisome, plasma membrane, plastid 90.86 93.59
TraesCS5B01G247700.1 Wheat nucleus, peroxisome, plasma membrane, plastid 90.86 93.59
TraesCS5B01G248000.1 Wheat plasma membrane, plastid 90.2 93.29
TraesCS5D01G257100.2 Wheat nucleus, peroxisome, plasma membrane, plastid 90.99 93.22
Os09t0472100-01 Rice plasma membrane 77.62 81.28
KXG35822 Sorghum mitochondrion, nucleus, peroxisome, plasma membrane 77.88 80.11
Zm00001d020811_P001 Maize nucleus, peroxisome, plasma membrane, plastid 76.56 78.53
Os09t0472200-00 Rice plasma membrane 74.44 78.49
GSMUA_AchrUn_... Banana plasma membrane 59.74 75.93
GSMUA_Achr10P... Banana plasma membrane 41.59 75.12
VIT_00s0822g00010.t01 Wine grape cytosol, peroxisome, plasma membrane 23.71 73.66
GSMUA_Achr6P04180_001 Banana plasma membrane 56.56 72.25
GSMUA_AchrUn_... Banana plasma membrane 54.04 69.62
Solyc05g051530.2.1 Tomato cytosol, peroxisome, plasma membrane 48.48 69.06
PGSC0003DMT400041814 Potato cytosol, peroxisome, plasma membrane 54.17 63.41
Solyc11g009100.1.1 Tomato cytosol, peroxisome, plasma membrane 54.17 63.02
PGSC0003DMT400043270 Potato cytosol 52.19 60.43
KRH42130 Soybean plasma membrane 50.33 59.28
KRH18202 Soybean cytosol, nucleus, plasma membrane, plastid 54.17 59.02
HORVU2Hr1G019010.2 Barley plasma membrane 32.58 58.71
KRH42133 Soybean extracellular 52.58 57.12
KRH18182 Soybean cytosol 50.99 56.95
KRH18189 Soybean cytosol, peroxisome, plasma membrane 51.92 56.89
KRH42131 Soybean cytosol, nucleus, plasma membrane 52.19 56.37
KRH18184 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 32.85 56.36
KRH42129 Soybean cytosol, peroxisome, plasma membrane 50.46 56.19
HORVU6Hr1G027440.10 Barley plastid 50.86 55.41
KRH42128 Soybean plasma membrane 43.05 52.17
KRH42124 Soybean cytosol 45.7 51.04
KRH18205 Soybean cytosol, peroxisome, plasma membrane 44.5 50.99
KRH18181 Soybean cytosol, peroxisome, plasma membrane 45.56 50.15
HORVU2Hr1G018920.1 Barley cytosol 33.51 49.51
KRH18188 Soybean cytosol 36.82 43.78
HORVU1Hr1G030200.1 Barley nucleus, peroxisome, plasma membrane 39.47 43.25
HORVU2Hr1G090960.2 Barley cytosol 42.52 42.46
HORVU4Hr1G041540.11 Barley plastid 11.92 40.18
HORVU5Hr1G125010.1 Barley cytosol, peroxisome, plasma membrane, plastid 32.05 33.47
AT3G21080.1 Thale cress cytosol, peroxisome, plasma membrane 10.6 31.37
HORVU7Hr1G122580.37 Barley endoplasmic reticulum, vacuole 21.46 18.47
HORVU6Hr1G091510.2 Barley mitochondrion 23.71 17.15
HORVU1Hr1G037250.2 Barley plasma membrane 21.99 16.31
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A287RPK3InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:HORVU5Hr1G070400
EnsemblPlants:HORVU5Hr1G070400.3InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF301SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI000B466AFCSEG:seg::::
Description
No Description!
Coordinates
chrchr5H:-:528454459..528459788
Molecular Weight (calculated)
82076.3 Da
IEP (calculated)
8.252
GRAVY (calculated)
0.038
Length
755 amino acids
Sequence
(BLAST)
001: VATSLGEEGT HITTQAPKHP RMASEQLLPA VPRWKPSPPR QHSRPGHDAE DEGPSDTASD VLGGSLRSTD GFPFGSGSSF PPPPFAPMPV TVPRSRTSSS
101: LEISVENGAG AGVPTVVRET SLRRVDQGVV LSWEDLSVSA AGGKAGRVPI LRGLSGYARP GEVLAIMGPS GCGKSTLLDA LAGRLGSGVS QKGDILINGR
201: RQKLSYGTSA YVTQDDVLMT TLTVREAVRY SASLQLPSGM SAAAKRERAE ETLREMGLEG AADTRIGGWM HKGISGGQRR RVSICMEILT RPALLFLDEP
301: TSGLDSAASF HVVSRIARLA RREGMTVVAA VHQPSTEVFG LFHGLCLLAY GKTVFFGPAA ETNQFFALSG FPCPSLMNPS DHFLRTINKD FDNDIEEGLS
401: GKKTTTAENI DALASSYKSS VHMDKVTRQI VDIRGIGGDV VKMDGQQPSF LTQSFVLTKR SFINMYRDLG YYWLRFAIYI ALCLCCGTIF YDIGQNYGSI
501: QARGSMLMFV GAFLTFMAIG GFPSFVEDMK IFGRERLNGH YGVSSFVIAN TVSSTPYLLL ISLVPGAMAY YLVGLQKSFD HFAYFALVLF VTMMLVEGLM
601: MIVASVVPDF LMGIITGAGI QGVMMLNGGF FRLPHDLPNP VWRYPMYYVA FHKYANQGFY KNEFLGLTFP NNQVGGATTI TGDEILRDYW QVEMGYSKWV
701: DLAVLFGMVI LYRVLFLAIM KLTEKVKPMV KGLGSRSTQP SVHVADEGSE GNETK
Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)
001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW
Arabidopsis Description
ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.