Factsheet for HORVU4Hr1G041540.11

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	40.18	11.92
HORVU6Hr1G027440.10	Barley	plastid	36.16	11.69
HORVU2Hr1G018920.1	Barley	cytosol	25.89	11.35
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	29.91	9.72
HORVU2Hr1G090960.2	Barley	cytosol	30.8	9.13
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	26.34	8.16
HORVU7Hr1G122580.37	Barley	endoplasmic reticulum, vacuole	26.34	6.73
HORVU2Hr1G019010.2	Barley	plasma membrane	11.61	6.21
HORVU6Hr1G091510.2	Barley	mitochondrion	28.57	6.13
HORVU1Hr1G037250.2	Barley	plasma membrane	26.79	5.89

Protein Annotations

EnsemblPlants:HORVU4Hr1G041540.11	EnsemblPlantsGene:HORVU4Hr1G041540	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:ABC_transporter-like	InterPro:IPR003439
InterPro:P-loop_NTPase	PANTHER:PTHR18901	PANTHER:PTHR18901:SF37	PFAM:PF00005	SEG:seg	SUPFAM:SSF52540
UniParc:UPI000B485B44	UniProt:A0A287NUW6	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:326329180..326331846

Molecular Weight (calculated)

24786.8 Da

IEP (calculated)

10.071

GRAVY (calculated)

-0.562

Length

224 amino acids

Sequence
(BLAST)

001: SVLPLHNEPS PVPLVLPDPI EASPHSPRPL GRRPTATRIA APTGFASLRS ETPVAATTRV RPRHLLQRLS GTRRLPHLEG AADTRIGGWM HKGISGGQRR
101: RVSICMEILT RPALLFLDEP TSGHPPPPPQ QQPPASSRRC HGDYPLSLAL PEGKRDVLKE FLETYGKVPD AAKEEKRLGQ MHRESTTGIN ADYGLPITVE
201: EYSEAIYPLY IKRTERLLSG GSWW

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.