Factsheet for HORVU1Hr1G030200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G019530.1
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G032550.3
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51500.1	HORVU0Hr1G001280.1	AT3G56800.1	15299147
AT1G51500.1	HORVU2Hr1G016740.4	AT3G56800.1	15299147
AT1G51500.1	HORVU3Hr1G038010.1	AT3G56800.1	15299147
AT1G51500.1	HORVU3Hr1G079210.4	AT3G56800.1	15299147
AT1G51500.1	HORVU4Hr1G026290.3	AT3G56800.1	15299147
AT1G51500.1	HORVU5Hr1G014060.1	AT3G56800.1	15299147
AT1G51500.1	HORVU5Hr1G014070.2	AT3G56800.1	15299147
AT1G51500.1	HORVU5Hr1G044710.4	AT3G56800.1	15299147
AT3G21090.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT3G21090.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	98.11	98.11
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	97.97	97.97
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	97.97	97.97
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	87.95	88.08
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	89.11	87.71
Zm00001d010426_P001	Maize	plastid	87.81	87.68
VIT_06s0061g00230.t01	Wine grape	plasma membrane	58.64	64.95
GSMUA_Achr4P00390_001	Banana	plasma membrane	58.35	64.94
CDX87823	Canola	nucleus, peroxisome, plasma membrane	61.25	62.33
AT3G21090.1	Thale cress	cytosol, peroxisome, plasma membrane	62.41	62.23
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	62.41	62.14
CDY43913	Canola	nucleus, peroxisome, plasma membrane	62.41	62.14
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	61.39	62.02
PGSC0003DMT400077106	Potato	cytosol, peroxisome, plasma membrane	61.25	61.88
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	62.41	61.87
AT1G51500.1	Thale cress	cytosol, peroxisome, plasma membrane	61.54	61.72
CDY06406	Canola	peroxisome	60.81	61.71
VIT_06s0061g00260.t01	Wine grape	cytosol	60.81	61.44
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	56.17	61.43
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	62.12	61.23
Bra031249.1-P	Field mustard	peroxisome	61.39	61.22
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	59.51	59.59
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	59.65	59.39
CDY49810	Canola	plasma membrane	52.39	57.3
Bra018911.1-P	Field mustard	plastid	52.25	57.14
CDY22844	Canola	plastid	52.1	56.98
AT1G51460.1	Thale cress	plasma membrane	55.59	56.49
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	55.73	55.81
KRH66902	Soybean	cytosol	23.51	55.1
CDY18337	Canola	plasma membrane	19.74	55.06
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	53.99	51.17
KRH66901	Soybean	plasma membrane	31.93	50.69
KRH66900	Soybean	plasma membrane	45.57	47.5
HORVU2Hr1G090960.2	Barley	cytosol	51.52	46.96
GSMUA_Achr4P00380_001	Banana	plastid	55.44	46.08
KRH66903	Soybean	extracellular	7.98	43.31
HORVU2Hr1G019010.2	Barley	plasma membrane	25.54	42.0
HORVU6Hr1G027440.10	Barley	plastid	39.77	39.54
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	43.25	39.47
HORVU2Hr1G018920.1	Barley	cytosol	28.3	38.16
HORVU4Hr1G041540.11	Barley	plastid	9.72	29.91
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	29.75	28.35
KRG95235	Soybean	plasma membrane	45.72	28.1
HORVU7Hr1G122580.37	Barley	endoplasmic reticulum, vacuole	22.21	17.45
HORVU6Hr1G091510.2	Barley	mitochondrion	23.22	15.33
HORVU1Hr1G037250.2	Barley	plasma membrane	22.35	15.13

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EMBL:AK364053	UniProt:F2DJI5	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:HORVU1Hr1G030200	EnsemblPlants:HORVU1Hr1G030200.1	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF338	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000200659B	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DJI5]

Coordinates

chrchr1H:+:172950323..172956027

Molecular Weight (calculated)

76377.3 Da

IEP (calculated)

9.458

GRAVY (calculated)

0.130

Length

689 amino acids

Sequence
(BLAST)

001: MGEGNGTAWA GALSPAARYA ETGGASLTWE NLTAVLPGSG GRPTKKLLQG LFGYAVPGRI VAIMGPSGSG KSTLLDSLSG RLARNVLQTG KVLLNGKKRR
101: LDFGAVAYVT QENVLLGTLT VRETVTYSAQ LRLPSSMSKA EVRRVVDDTL DEMGLRECAD RPVGTWHLRG ISGGEKKRLC IALEILTRPR LLFLDEPTSG
201: LDSASAFSVI ETLRTLAIDG GRTIVSSVHQ PSSEVFALFD DLCLLSSGES VYFGDAKLAP QFFAETGFPC PSRRNPSDHF LRCVNSDFDD VATAMKGSMK
301: LRAEADLDPL LKYSTSEIRE RLVDKYRISD YAMMVRNTIN EISKIEGVLE EAVKGSQATW CKQLRTLTKR SYINMYRDFG YYRLRIIIYV LMAICLGTIY
401: YDVGNSYTAI QARASCGGFV SGFMTFMSIG GFPSFIEEMK VFSLERQNGH YGVAAYIISN FLSSMPFLLT MSWASASITY WMVKFRPGFS YFAFFALNLY
501: GGVSVIESLM MIISALVPNF LMGLILGAGV IGIMMLTSGF FRLLPELPKI FWKYPVSYIV YGSWGLKGAY KNDLLGLEFE PMTPGGDKLT GEFIITNMMG
601: LSVSYSKWLD LAMIFILLLA YRVTFFFVLK VKEAAAPYIR VAYTRFTVKR LERRASFRES LAMTSLSKRH NTPHPMAMQE GLNSPIQQY

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.