Factsheet for Bra030437.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000820.1-P
Bra003251.1-P
Bra007269.1-P
Bra014671.1-P
Bra034219.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51500.1	Bra003251.1-P	AT3G56800.1	15299147
AT1G51500.1	Bra007269.1-P	AT3G56800.1	15299147
AT1G51500.1	Bra014671.1-P	AT3G56800.1	15299147
AT1G51500.1	Bra000820.1-P	AT4G03560.1	15299147
AT1G51500.1	Bra034219.1-P	AT4G03560.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43913	Canola	nucleus, peroxisome, plasma membrane	100.0	100.0
AT1G51500.1	Thale cress	cytosol, peroxisome, plasma membrane	94.94	95.63
Bra031249.1-P	Field mustard	peroxisome	85.12	85.24
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	73.41	73.09
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	73.12	72.39
VIT_06s0061g00230.t01	Wine grape	plasma membrane	64.6	71.86
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	68.35	69.35
PGSC0003DMT400077106	Potato	cytosol, peroxisome, plasma membrane	68.21	69.21
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	63.01	63.37
Zm00001d010426_P001	Maize	plastid	63.15	63.33
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	62.28	62.55
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	62.28	62.55
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	62.14	62.41
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	62.14	62.41
GSMUA_Achr4P00390_001	Banana	plasma membrane	55.35	61.87
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	62.57	61.86
Bra018911.1-P	Field mustard	plastid	53.61	58.89
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.14	51.33
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.73	51.07
GSMUA_Achr4P00380_001	Banana	plastid	53.76	44.87
Bra011981.1-P	Field mustard	plastid	32.37	30.6
Bra034385.1-P	Field mustard	plastid	28.76	28.88
Bra038121.1-P	Field mustard	plasma membrane	23.41	15.37
Bra005224.1-P	Field mustard	plasma membrane	22.11	14.83
Bra039668.1-P	Field mustard	plasma membrane	23.12	14.73
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.41	14.32
Bra028945.1-P	Field mustard	plasma membrane	22.54	13.6

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra030437	EnsemblPlants:Bra030437.1	EnsemblPlants:Bra030437.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009737
GO:GO:0010025	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
UniProt:M4ENR7	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF338	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00025479EC
SEG:seg	:	:	:	:	:

Description

AT1G51500 (E=0.0) CER5, D3, ABCG12, WBC12, ATWBC12 | CER5 (ECERIFERUM 5); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA05:+:11198844..11202276

Molecular Weight (calculated)

76903.6 Da

IEP (calculated)

9.621

GRAVY (calculated)

0.101

Length

692 amino acids

Sequence
(BLAST)

001: MELDSASNGR PSRPPPPPPA PAIGRGAYLA WEDLTVVIPN FSGGPTRRLL DGLNGYAEPG RIMAIMGPSG SGKSTLLDSL AGRLARNVIM TGNLLLNGKK
101: ARLDYGLVAY VTQEDVLMGT LTVRETITYS AHLRLSNDLT KEEVNGIVEG TIIELGLQDC ADRVIGSWQS RGVSGGERKR VSIALEILTR PQILFLDEPT
201: SGLDSASAFF VIQALRNIAR DGGRTVVSSI HQPSSEVFAL FDDLFLLSSG ETVYFGESKF AVEFFAEAGF PCPKKRNPSD HFLRCINSDF DTVTATLKGS
301: QRMRETPATS DPLMNLATSE IKARLVENYR RSVYAKSAKS RIRELASIEG HHEMEVRKGS EASWFKQLRT LTKRSFVNMC RDIGYYWSRI VIYIVVSICV
401: GTIFYDVGHS YTSILARVSC GGFITGFMTF MSIGGFPSFI EEMKVFYKER LSGYYGVSVY IISNYVSSFP FLVAISGITG SITYNMVKFR PGFSHWAFFC
501: LNIFFSVSVI ESLMMVVASL VPNFLMGLIT GAGIIGIIMM TSGFFRLLPD LPKIFWRYPI SFMSYGSWAI QGAYKNDFLG LEFEPMFAGE PKMTGEEVIQ
601: KIFGVKVTHS KWWDLAAIVL ILVCYRILFF IVLKLKERAE PALKALQAKR TMRSLNKRPS FRKVPSLSSL SSRRHQALHS LSSQEGLTSP IH

Best Arabidopsis Sequence Match ( AT1G51500.1 )
(BLAST)

001: MELESTSNGR RPPPPAEIGR GAYLAWEDLT VVIPNFSGGP TRRLLDGLNG HAEPGRIMAI MGPSGSGKST LLDSLAGRLA RNVIMTGNLL LNGKKARLDY
101: GLVAYVTQED ILMGTLTVRE TITYSAHLRL SSDLTKEEVN DIVEGTIIEL GLQDCADRVI GNWHSRGVSG GERKRVSVAL EILTRPQILF LDEPTSGLDS
201: ASAFFVIQAL RNIARDGGRT VVSSIHQPSS EVFALFDDLF LLSSGETVYF GESKFAVEFF AEAGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIRE
301: TPATSDPLMN LATSEIKARL VENYRRSVYA KSAKSRIREL ASIEGHHGME VRKGSEATWF KQLRTLTKRS FVNMCRDIGY YWSRIVIYIV VSFCVGTIFY
401: DVGHSYTSIL ARVSCGGFIT GFMTFMSIGG FPSFIEEMKV FYKERLSGYY GVSVYIISNY VSSFPFLVAI ALITGSITYN MVKFRPGVSH WAFFCLNIFF
501: SVSVIESLMM VVASLVPNFL MGLITGAGII GIIMMTSGFF RLLPDLPKVF WRYPISFMSY GSWAIQGAYK NDFLGLEFDP MFAGEPKMTG EQVINKIFGV
601: QVTHSKWWDL SAIVLILVCY RILFFIVLKL KERAEPALKA IQAKRTMKSL KKRPSFKKVP SLSSLSSRRH QPLHSLSSQE GLTSPIN

Arabidopsis Description

ABCG12WBC12 [Source:UniProtKB/TrEMBL;Acc:A0A178W3S0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.