Factsheet for Bra014671.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001117.1-P
Bra004553.1-P
Bra007262.1-P
Bra010005.1-P
Bra010231.1-P
Bra011282.1-P
Bra013779.1-P
Bra018303.1-P
Bra019239.1-P
Bra020617.1-P
Bra021652.1-P
Bra022808.1-P
Bra023998.1-P
Bra030437.1-P
Bra032084.1-P
Bra032174.1-P
Bra040396.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56800.1	Bra030437.1-P	AT1G51500.1	15299147
AT3G56800.1	Bra032174.1-P	AT2G23320.1	15733871
AT3G56800.1	Bra032084.1-P	AT2G24570.1	15733871
AT3G56800.1	Bra018303.1-P	AT2G30590.1	15733871
AT3G56800.1	Bra021652.1-P	AT2G30590.1	15733871
AT3G56800.1	Bra022808.1-P	AT2G30590.1	15733871
AT3G56800.1	Bra004553.1-P	AT2G46240.1	16003391
AT3G56800.1	Bra001117.1-P	AT3G04670.1	15733871
AT3G56800.1	Bra040396.1-P	AT3G04670.1	15733871
AT3G56800.1	Bra007262.1-P	AT3G56690.1	11346951
AT3G56800.1	Bra013779.1-P	AT4G24240.1	15733871
AT3G56800.1	Bra019239.1-P	AT4G24240.1	15733871
AT3G56800.1	Bra010231.1-P	AT4G31550.1	15733871
AT3G56800.1	Bra011282.1-P	AT4G31550.1	15733871
AT3G56800.1	Bra023998.1-P	AT4G31550.1	15733871
AT3G56800.1	Bra010005.1-P	AT5G28650.1	15733871
AT3G56800.1	Bra020617.1-P	AT5G28650.1	15733871

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G56800.1	Thale cress	cytosol	100.0	100.0
Bra000214.1-P	Field mustard	cytosol	100.0	100.0
Bra003251.1-P	Field mustard	cytosol	100.0	100.0
Bra007269.1-P	Field mustard	cytosol	99.33	99.33
Solyc10g081170.1.1	Tomato	extracellular	99.33	99.33
VIT_08s0040g00470.t01	Wine grape	cytosol	99.33	99.33
Bra002368.1-P	Field mustard	cytosol	98.66	98.66
Bra006595.1-P	Field mustard	cytosol	98.66	98.66
Bra020155.1-P	Field mustard	cytosol	98.66	98.66
Os01t0267900-01	Rice	cytosol	98.66	98.66
Os03t0319300-01	Rice	cytosol, extracellular, nucleus	98.66	98.66
Os07t0687200-02	Rice	cytosol	98.66	98.66
PGSC0003DMT400018569	Potato	cytosol	98.66	98.66
PGSC0003DMT400070437	Potato	cytosol	98.66	98.66
Solyc10g077010.1.1	Tomato	cytosol	98.66	98.66
Solyc11g072240.1.1	Tomato	cytosol	98.66	98.66
Solyc12g099990.1.1	Tomato	nucleus	98.66	98.66
Bra012037.1-P	Field mustard	cytosol	97.99	97.99
Bra019453.1-P	Field mustard	cytosol	97.99	97.99
GSMUA_Achr10P...	Banana	cytosol, plasma membrane	97.99	97.99
GSMUA_Achr3P09330_001	Banana	cytosol	97.99	97.99
GSMUA_Achr5P07820_001	Banana	cytosol	97.99	97.99
GSMUA_Achr6P23670_001	Banana	cytosol	97.99	97.99
KRG94975	Soybean	nucleus	97.99	97.99
PGSC0003DMT400058435	Potato	cytosol	97.99	97.99
Solyc01g008950.2.1	Tomato	nucleus	97.99	97.99
GSMUA_Achr5P27590_001	Banana	cytosol	75.84	97.41
PGSC0003DMT400046278	Potato	cytosol	50.34	97.4
GSMUA_Achr10P...	Banana	cytosol	97.32	97.32
GSMUA_Achr2P01120_001	Banana	cytosol	97.32	97.32
GSMUA_Achr3P25040_001	Banana	cytosol	97.32	97.32
GSMUA_Achr6P15990_001	Banana	cytosol	97.32	97.32
GSMUA_Achr9P17280_001	Banana	cytosol	97.32	97.32
Os01t0279300-01	Rice	cytosol, plasma membrane, plastid	97.32	97.32
Os05t0491100-01	Rice	cytosol, extracellular	97.32	97.32
Zm00001d008278_P001	Maize	cytosol	82.55	96.85
VIT_06s0009g01910.t01	Wine grape	cytosol	99.33	96.73
Bra034981.1-P	Field mustard	cytosol	93.96	96.55
GSMUA_Achr11P...	Banana	cytosol	65.77	96.08
Bra004166.1-P	Field mustard	cytosol	95.97	95.97
Bra025438.1-P	Field mustard	cytosol	72.48	95.58
PGSC0003DMT400054299	Potato	cytosol	72.48	95.58
TraesCS1A01G308800.1	Wheat	cytosol	83.89	95.42
KRH18664	Soybean	cytosol	83.89	89.29
TraesCS3A01G184500.1	Wheat	cytosol	97.99	89.02
TraesCS3D01G188600.1	Wheat	cytosol	98.66	88.02
Zm00001d038545_P001	Maize	cytosol, mitochondrion	85.91	85.91
Zm00001d047597_P001	Maize	cytosol	83.89	85.03
PGSC0003DMT400014123	Potato	mitochondrion	69.13	84.43
TraesCS2B01G113800.2	Wheat	cytosol	98.66	84.0
TraesCS3B01G219900.1	Wheat	cytosol	96.64	82.76
Bra034317.1-P	Field mustard	cytosol	99.33	82.68
TraesCS3A01G191900.1	Wheat	cytosol	82.55	77.36
TraesCS3D01G194500.2	Wheat	cytosol	82.55	77.36
Zm00001d038543_P004	Maize	plastid	85.91	75.74
TraesCS3A01G335000.1	Wheat	cytosol	91.95	75.27
TraesCS3D01G328300.1	Wheat	cytosol	91.95	75.27
KRG89812	Soybean	cytosol, mitochondrion	83.22	75.15
HORVU3Hr1G079210.4	Barley	cytosol	91.95	74.46
HORVU3Hr1G038010.1	Barley	cytosol, plastid	98.66	73.87
TraesCS3B01G365900.1	Wheat	cytosol	90.6	73.77
PGSC0003DMT400097662	Potato	cytosol, mitochondrion	84.56	72.83
Bra001892.1-P	Field mustard	cytosol	75.17	72.73
Bra023786.1-P	Field mustard	cytosol	75.84	72.44
Bra033898.1-P	Field mustard	cytosol	75.17	72.26
EES01631	Sorghum	cytosol	85.23	69.02
HORVU2Hr1G016740.4	Barley	cytosol	98.66	68.37
Bra039723.1-P	Field mustard	cytosol	69.8	67.97
Os01t0810300-01	Rice	plasma membrane	84.56	67.38
CDY57144	Canola	cytosol	65.77	67.12
Zm00001d043144_P001	Maize	plasma membrane	81.88	66.67
Zm00001d028948_P001	Maize	cytosol	87.25	65.99
GSMUA_Achr10P...	Banana	cytosol	78.52	62.23
TraesCS5D01G068100.1	Wheat	cytosol	67.79	61.96
GSMUA_Achr10P...	Banana	cytosol	78.52	61.9
TraesCS5A01G057100.1	Wheat	cytosol	67.79	61.21
TraesCS5B01G137100.1	Wheat	cytosol	73.83	61.11
Zm00001d041430_P001	Maize	cytosol	69.13	60.95
TraesCS5A01G057200.1	Wheat	cytosol	66.44	60.74
EES09201	Sorghum	cytosol	73.15	60.56
HORVU5Hr1G044710.4	Barley	cytosol	73.15	60.56
TraesCS5A01G139700.1	Wheat	cytosol	73.15	60.56
TraesCS5D01G153400.1	Wheat	cytosol	73.15	60.56
EES16322	Sorghum	cytosol	71.14	60.23
TraesCS5D01G068000.1	Wheat	cytosol	67.79	60.12
HORVU5Hr1G014070.2	Barley	cytosol	66.44	59.64
Os12t0603800-00	Rice	cytosol	66.44	59.64
TraesCS5B01G059900.1	Wheat	cytosol	67.11	59.52
Zm00001d005003_P002	Maize	cytosol	70.47	58.33
Zm00001d052415_P001	Maize	cytosol	61.74	58.23
Bra019756.1-P	Field mustard	cytosol	48.99	49.32
Bra026976.1-P	Field mustard	cytosol	48.99	49.32
HORVU5Hr1G014060.1	Barley	cytosol, plastid	67.11	46.73
Os05t0491000-01	Rice	cytosol	47.65	45.81
TraesCS1D01G308000.1	Wheat	cytosol	44.97	44.67
HORVU0Hr1G001280.1	Barley	cytosol	44.97	44.37
TraesCS1A01G308700.1	Wheat	cytosol	44.97	44.08
TraesCS1B01G319300.1	Wheat	cytosol	44.3	44.0
TraesCS4B01G131100.1	Wheat	cytosol	66.44	42.86
Zm00001d010649_P001	Maize	extracellular	40.27	42.25
TraesCS4D01G126100.1	Wheat	cytosol	67.79	41.91
HORVU4Hr1G026290.3	Barley	cytosol, plastid	61.74	41.63
Bra040770.1-P	Field mustard	cytosol	44.3	39.76
OQU78227	Sorghum	cytosol	47.65	39.66
Bra021379.1-P	Field mustard	cytosol	44.3	39.05
Bra025896.1-P	Field mustard	cytosol	38.26	36.31
Bra017355.1-P	Field mustard	cytosol	38.26	35.4
Bra025149.1-P	Field mustard	cytosol	38.26	35.19
GSMUA_Achr8P05790_001	Banana	cytosol	46.31	28.16

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EnsemblPlantsGene:Bra014671	EnsemblPlants:Bra014671.1	EnsemblPlants:Bra014671.1-P	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005856	GO:GO:0005874
InterPro:IPR002048	UniProt:M4CGB8	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050
PANTHER:PTHR23050:SF250	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000000036D	:	:

Description

AT2G27030 (E=1e-081) CAM5 | CAM5 (CALMODULIN 5); calcium ion binding

Coordinates

chrA04:+:2124504..2125665

Molecular Weight (calculated)

16820.6 Da

IEP (calculated)

3.876

GRAVY (calculated)

-0.615

Length

149 amino acids

Sequence
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK

Best Arabidopsis Sequence Match ( AT2G27030.3 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAKR RGKRVMAAKR SSNSAEYKEK NGRRKSHCRI L

Arabidopsis Description

CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.