Factsheet for Bra023786.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34215	Canola	cytosol	100.0	100.0
CDX94883	Canola	cytosol	68.59	96.4
Bra001892.1-P	Field mustard	cytosol	94.23	95.45
Bra033898.1-P	Field mustard	cytosol	94.23	94.84
CDY10325	Canola	cytosol	66.67	92.04
CDY40824	Canola	cytosol	99.36	86.11
VIT_05s0020g04420.t01	Wine grape	cytosol	80.77	84.56
AT3G22930.1	Thale cress	cytosol	93.59	84.39
KRH31638	Soybean	cytosol	80.77	84.0
KRH69070	Soybean	cytosol	80.77	84.0
Solyc06g053930.2.1	Tomato	cytosol	77.56	81.21
PGSC0003DMT400042062	Potato	cytosol	77.56	80.67
Bra039723.1-P	Field mustard	cytosol	77.56	79.08
GSMUA_Achr2P12680_001	Banana	cytosol	75.0	79.05
GSMUA_Achr7P01390_001	Banana	cytosol	74.36	78.38
GSMUA_Achr4P22570_001	Banana	cytosol	74.36	78.38
GSMUA_Achr1P27230_001	Banana	cytosol	74.36	78.38
GSMUA_Achr6P24410_001	Banana	cytosol	73.72	77.18
GSMUA_Achr1P04700_001	Banana	cytosol	73.08	77.03
Bra000214.1-P	Field mustard	cytosol	72.44	75.84
Bra002368.1-P	Field mustard	cytosol	72.44	75.84
Bra003251.1-P	Field mustard	cytosol	72.44	75.84
Bra006595.1-P	Field mustard	cytosol	72.44	75.84
Bra020155.1-P	Field mustard	cytosol	72.44	75.84
Bra014671.1-P	Field mustard	cytosol	72.44	75.84
GSMUA_Achr5P09010_001	Banana	cytosol	71.79	75.68
Bra025438.1-P	Field mustard	cytosol	54.49	75.22
Bra004166.1-P	Field mustard	cytosol	71.79	75.17
Bra007269.1-P	Field mustard	cytosol	71.79	75.17
Bra012037.1-P	Field mustard	cytosol	71.79	75.17
Bra019453.1-P	Field mustard	cytosol	71.79	75.17
Bra034981.1-P	Field mustard	cytosol	67.95	73.1
PGSC0003DMT400034833	Potato	cytosol	66.03	67.32
Solyc03g005240.1.1	Tomato	cytosol	64.74	66.01
Os03t0743500-02	Rice	nucleus	64.1	64.94
KXG37587	Sorghum	cytosol	62.82	63.64
Bra034317.1-P	Field mustard	cytosol	71.79	62.57
Zm00001d033980_P001	Maize	cytosol	51.92	51.59
GSMUA_Achr3P25390_001	Banana	cytosol	59.62	50.82
TraesCS5A01G382800.2	Wheat	plastid	58.97	49.2
GSMUA_Achr1P14070_001	Banana	cytosol	64.74	44.69
Bra021379.1-P	Field mustard	cytosol	41.03	37.87
Bra019756.1-P	Field mustard	cytosol	35.26	37.16
Bra026976.1-P	Field mustard	cytosol	35.26	37.16
Bra025896.1-P	Field mustard	cytosol	35.9	35.67
Bra040770.1-P	Field mustard	cytosol	37.82	35.54
Bra017355.1-P	Field mustard	cytosol	35.9	34.78
Bra025149.1-P	Field mustard	cytosol	35.9	34.57
KXG37588	Sorghum	mitochondrion, nucleus	0.64	0.73

Protein Annotations

EnsemblPlants:Bra023786.1	EnsemblPlants:Bra023786.1-P	EnsemblPlantsGene:Bra023786	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23050
PANTHER:PTHR23050:SF336	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0002543F86	UniProt:M4E4T2	MapMan:35.1	:	:

Description

AT3G22930 (E=7e-074) | calmodulin, putative

Coordinates

chrA01:+:19926728..19928258

Molecular Weight (calculated)

17781.7 Da

IEP (calculated)

3.739

GRAVY (calculated)

-0.621

Length

156 amino acids

Sequence
(BLAST)

001: MDKTQLQQQE LTQEQIMEFK EAFCLFDKDG DGCITADELA TVIRSLDQNP TEQELQDMIN EIDSDGNGTI EFSEFLNLMA NKIQETDADE ELKEAFKVFD
101: KDQNGYISAS ELRHVMINLG EKLTDEEVAQ MIKEADLDGD GQVNYDEFVR MMMTSG

Best Arabidopsis Sequence Match ( AT3G22930.1 )
(BLAST)

001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING

Arabidopsis Description

CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.