Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0743500-02 | Rice | nucleus | 92.21 | 92.21 |
| Zm00001d033980_P001 | Maize | cytosol | 79.22 | 77.71 |
| KRG92449 | Soybean | cytosol | 66.23 | 68.0 |
| KRH34350 | Soybean | cytosol | 65.58 | 67.33 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 64.94 | 67.11 |
| PGSC0003DMT400042062 | Potato | cytosol | 64.94 | 66.67 |
| Solyc06g053930.2.1 | Tomato | cytosol | 64.29 | 66.44 |
| KRH69070 | Soybean | cytosol | 64.29 | 66.0 |
| KRH31638 | Soybean | cytosol | 64.29 | 66.0 |
| TraesCS5A01G382800.2 | Wheat | plastid | 79.22 | 65.24 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.39 | 63.27 |
| CDY34215 | Canola | cytosol | 63.64 | 62.82 |
| Bra023786.1-P | Field mustard | cytosol | 63.64 | 62.82 |
| CDX92965 | Canola | cytosol | 62.34 | 62.34 |
| Bra001892.1-P | Field mustard | cytosol | 62.34 | 62.34 |
| CDY10686 | Canola | cytosol | 62.34 | 61.94 |
| Bra033898.1-P | Field mustard | cytosol | 62.34 | 61.94 |
| AT4G14640.1 | Thale cress | cytosol | 60.39 | 61.59 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 59.09 | 61.49 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 61.04 | 61.44 |
| KRH67274 | Soybean | cytosol | 57.79 | 60.14 |
| KRG96966 | Soybean | cytosol | 57.79 | 59.73 |
| KRH68729 | Soybean | cytosol | 57.79 | 59.73 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 57.14 | 59.06 |
| CDY06478 | Canola | cytosol | 57.79 | 58.94 |
| PGSC0003DMT400034833 | Potato | cytosol | 58.44 | 58.82 |
| KRG95596 | Soybean | cytosol | 56.49 | 58.78 |
| EES16322 | Sorghum | cytosol | 66.88 | 58.52 |
| Bra039723.1-P | Field mustard | cytosol | 57.14 | 57.52 |
| Solyc03g005240.1.1 | Tomato | cytosol | 57.14 | 57.52 |
| AT3G22930.1 | Thale cress | cytosol | 63.64 | 56.65 |
| CDX94883 | Canola | cytosol | 40.26 | 55.86 |
| EER90981 | Sorghum | cytosol | 53.9 | 55.7 |
| PGSC0003DMT400083727 | Potato | cytosol | 52.6 | 55.1 |
| KRH34082 | Soybean | cytosol | 53.25 | 55.03 |
| CDY10325 | Canola | cytosol | 40.26 | 54.87 |
| CDY40824 | Canola | cytosol | 63.64 | 54.44 |
| Solyc01g105630.2.1 | Tomato | cytosol | 51.95 | 54.42 |
| KRG92667 | Soybean | cytosol | 51.95 | 53.69 |
| EES01631 | Sorghum | cytosol | 61.04 | 51.09 |
| KRG94637 | Soybean | cytosol | 37.66 | 50.88 |
| KRH71363 | Soybean | cytosol | 48.05 | 49.66 |
| EES09201 | Sorghum | cytosol | 56.49 | 48.33 |
| KRH32074 | Soybean | cytosol | 44.81 | 46.31 |
| OQU79799 | Sorghum | cytosol | 38.31 | 39.86 |
| EES19997 | Sorghum | plastid | 38.31 | 31.72 |
| OQU78227 | Sorghum | cytosol | 35.06 | 30.17 |
| KXG36700 | Sorghum | cytosol | 33.12 | 29.65 |
| OQU84270 | Sorghum | cytosol, plastid | 37.66 | 26.48 |
| EES03239 | Sorghum | plastid | 38.96 | 25.42 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:KXG37587 | EnsemblPlantsGene:SORBI_3001G094400 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF198 |
| PFAM:PF13499 | PFscan:PS50222 | ProteinID:KXG37587 | ProteinID:KXG37587.1 | ScanProsite:PS00018 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI00081AD97A | UniProt:A0A1B6QI45 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:7248888..7251372
Molecular Weight (calculated)
17322.2 Da
IEP (calculated)
3.762
GRAVY (calculated)
-0.573
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGLTDEQRL AFQEAFSLFD KNGDGCITME ELAAVTRSLG LDPSDQELND MMSEVDTDGN GIIDFQEFLS LIARKMKDGD GDEELREAFE VLDKDQNGFI
101: SPIELRTVMT NLGEKMTDEE VEQMIREADT DGDGQVNYDE FVLMMKNAER KISG
101: SPIELRTVMT NLGEKMTDEE VEQMIREADT DGDGQVNYDE FVLMMKNAER KISG
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.