CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	EES01631	AT2G41090.1	17360592
AT4G02410.1	EES09201	AT2G41090.1	17360592
AT4G02410.1	EES16322	AT2G41090.1	17360592
AT4G02410.1	OQU78227	AT2G41090.1	17360592
AT4G02410.1	EES01631	AT2G41100.1	17360592
AT4G02410.1	EES09201	AT2G41100.1	17360592
AT4G02410.1	EES16322	AT2G41100.1	17360592
AT4G02410.1	OQU78227	AT2G41100.1	17360592
AT4G02410.1	KXG37587	AT4G14640.1	17360592
AT4G02410.1	KXG37588	AT4G14640.1	17360592
AT4G02410.1	EES01631	AT5G21274.1	17360592
AT4G02410.1	EES09201	AT5G21274.1	17360592
AT4G02410.1	EES16322	AT5G21274.1	17360592
AT4G02410.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88393	Sorghum	cytosol	42.53	58.12
OQU76295	Sorghum	cytosol, nucleus, plastid	49.54	57.32
CDX91325	Canola	cytosol, mitochondrion	23.02	57.2
OQU78436	Sorghum	cytosol	48.02	54.59
KXG24408	Sorghum	plasma membrane	53.66	53.09
OQU88865	Sorghum	plasma membrane	44.36	50.79
EER97934	Sorghum	plasma membrane	52.59	50.37
EER93380	Sorghum	plasma membrane	52.29	50.22
OQU82016	Sorghum	plasma membrane	52.74	50.07
EER90817	Sorghum	plasma membrane	49.09	50.0
OQU90148	Sorghum	plasma membrane	51.83	49.85
EER99594	Sorghum	plasma membrane	51.68	49.56
PGSC0003DMT400052365	Potato	plasma membrane	50.3	49.55
KRH49145	Soybean	plasma membrane	50.3	49.48
VIT_08s0007g00810.t01	Wine grape	plasma membrane	51.22	49.41
EER95837	Sorghum	plasma membrane	50.61	49.4
KXG19863	Sorghum	plasma membrane	50.3	49.4
KXG38456	Sorghum	plasma membrane	51.68	49.34
EES12555	Sorghum	plasma membrane	50.76	49.33
EER93379	Sorghum	plasma membrane	50.91	49.19
KRH00016	Soybean	plasma membrane	50.0	49.18
KXG24409	Sorghum	plasma membrane	50.0	49.1
AT2G37710.1	Thale cress	plasma membrane	50.3	48.89
EER98367	Sorghum	plasma membrane	50.0	48.88
CDY21254	Canola	plasma membrane	48.48	48.85
OQU76282	Sorghum	plasma membrane	47.1	48.66
PGSC0003DMT400022983	Potato	plasma membrane	49.24	48.57
KXG22552	Sorghum	plasma membrane	46.65	48.57
OQU76297	Sorghum	plasma membrane	43.45	48.55
CDX91384	Canola	plasma membrane	49.54	48.29
EER94173	Sorghum	plasma membrane	51.68	48.29
CDY65835	Canola	plasma membrane	48.48	48.25
AT3G53810.1	Thale cress	plasma membrane	49.39	47.86
Bra005168.1-P	Field mustard	plasma membrane	49.09	47.85
EER97932	Sorghum	plasma membrane	50.61	47.7
Bra035326.1-P	Field mustard	plasma membrane	48.63	47.54
Bra018553.1-P	Field mustard	plasma membrane	48.17	47.38
OQU76281	Sorghum	plasma membrane	49.54	47.24
AT4G02420.1	Thale cress	plasma membrane	48.02	47.09
Solyc09g011990.1.1	Tomato	plasma membrane	47.71	46.86
EES07549	Sorghum	cytosol, plasma membrane, plastid	46.65	46.79
PGSC0003DMT400022743	Potato	plasma membrane	47.56	46.71
Solyc09g012000.1.1	Tomato	plasma membrane	47.41	46.49
CDY55369	Canola	plasma membrane	47.41	46.42
AT4G02410.1	Thale cress	plasma membrane	47.41	46.14
KXG34333	Sorghum	plasma membrane	50.3	46.03
CDX90939	Canola	plasma membrane	46.19	45.84
OQU84848	Sorghum	plasma membrane	49.39	45.83
Bra000880.1-P	Field mustard	plasma membrane	47.41	45.8
Bra000881.1-P	Field mustard	plasma membrane	47.1	45.78
CDY02414	Canola	plasma membrane	41.16	45.76
Zm00001d007803_P001	Maize	plasma membrane	48.78	44.82
KXG37241	Sorghum	mitochondrion	44.97	40.92
EER94566	Sorghum	plasma membrane	41.31	40.03
EES17246	Sorghum	plasma membrane	42.23	39.97
Solyc09g011060.2.1	Tomato	plasma membrane	47.41	37.38
GSMUA_Achr9P09920_001	Banana	plasma membrane	40.4	27.95
OQU92890	Sorghum	plasma membrane	53.05	26.19
GSMUA_Achr9P10000_001	Banana	cytosol	38.87	13.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	UniProt:A0A1W0W1Y8	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	EnsemblPlants:OQU88397	ProteinID:OQU88397	ProteinID:OQU88397.1
PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007
PANTHER:PTHR27007:SF28	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G025100	SUPFAM:SSF49899
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0009DC8D8F	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:2330554..2332524

Molecular Weight (calculated)

73559.2 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.086

Length

656 amino acids

Sequence
(BLAST)

001: EFVFNGFNDS SGWTLQGSAV VLPNGILNLG ATNSSSVAYP NSLAFYPSPF QMRNLTDSST FSFSATFAFA ILPYEDSARD GIAFVIAPNT SFTNVTRYDY
101: FGLLDREDSG KSSNHLAYIE LDIWCDREFG DIDNNHVGIN INSLKSSRSS PAGYYMDDPF SDLHPLRLSS GKVMQVWIDY DHSLMQLNVS LAPILEPKPK
201: HSLLSHTIDL SQVLLDHMYV GFSSAASWDC YGCFILGCSF KVNGKPSSLD YSKLPRVNKT KLPSPFILDY PKLASRVFIF PFYIFIGSAG TLILLVPIIL
301: AVRRCYRYRE IREDWELEFG PHRFSYKDLF HATDGFKDKQ LLGTGGFGKV YKGVLPSSKL KVAVKVMSHD SKQGMKEFIA EVVSIGRLRH RNLVQLLGYC
401: RRKGELLLVY EYMSNGSLDK HLYDLEMPSM GWAQRFEIIK GVASGLLYLH EEWEQVVIHR DVKASNVLLD GEMNGRLGDF GLARLHDHGV EAHTTCVAGT
501: RGYISPELAR LGKATKATDV FAFGAFILEV ACGRRPIGVN SHGEPQLLVD FVLKFWQRDL IVCMMDPRLE GEYVREEAEL VLKLGLLCSH PSPVNRPSMR
601: LVMQYLCGDT PFPEMPDAYL NIRSISELHD NEIASSEYDA QYTSVHTSIS SLLGGR

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.