CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	EES01631	AT2G41090.1	17360592
AT4G02410.1	EES09201	AT2G41090.1	17360592
AT4G02410.1	EES16322	AT2G41090.1	17360592
AT4G02410.1	OQU78227	AT2G41090.1	17360592
AT4G02410.1	EES01631	AT2G41100.1	17360592
AT4G02410.1	EES09201	AT2G41100.1	17360592
AT4G02410.1	EES16322	AT2G41100.1	17360592
AT4G02410.1	OQU78227	AT2G41100.1	17360592
AT4G02410.1	KXG37587	AT4G14640.1	17360592
AT4G02410.1	KXG37588	AT4G14640.1	17360592
AT4G02410.1	EES01631	AT5G21274.1	17360592
AT4G02410.1	EES09201	AT5G21274.1	17360592
AT4G02410.1	EES16322	AT5G21274.1	17360592
AT4G02410.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032870_P001	Maize	plasma membrane	93.01	92.88
Os10t0441900-01	Rice	plasma membrane	79.18	78.73
OQU88393	Sorghum	cytosol	42.94	61.46
EER90817	Sorghum	plasma membrane	55.9	59.63
EES12555	Sorghum	plasma membrane	58.22	59.26
EER99594	Sorghum	plasma membrane	58.95	59.21
EER94173	Sorghum	plasma membrane	60.26	58.97
EER93380	Sorghum	plasma membrane	58.22	58.57
OQU82016	Sorghum	plasma membrane	58.81	58.47
OQU90148	Sorghum	plasma membrane	57.79	58.21
EES07549	Sorghum	cytosol, plasma membrane, plastid	55.02	57.8
EER97934	Sorghum	plasma membrane	57.06	57.23
EER93379	Sorghum	plasma membrane	56.04	56.7
OQU76295	Sorghum	cytosol, nucleus, plastid	46.58	56.44
OQU76281	Sorghum	plasma membrane	56.48	56.4
OQU78436	Sorghum	cytosol	47.31	56.33
CDX91325	Canola	cytosol, mitochondrion	21.54	56.06
EER98367	Sorghum	plasma membrane	54.44	55.74
VIT_08s0007g00810.t01	Wine grape	plasma membrane	54.88	55.44
EER97932	Sorghum	plasma membrane	56.04	55.32
OQU76282	Sorghum	plasma membrane	50.95	55.12
OQU88865	Sorghum	plasma membrane	45.71	54.8
EER95837	Sorghum	plasma membrane	53.57	54.76
KRH49145	Soybean	plasma membrane	52.98	54.57
KXG34333	Sorghum	plasma membrane	56.62	54.25
KXG24409	Sorghum	plasma membrane	52.69	54.19
KXG19863	Sorghum	plasma membrane	52.69	54.19
KXG22552	Sorghum	plasma membrane	49.64	54.13
KRH00016	Soybean	plasma membrane	52.55	54.12
KXG24408	Sorghum	plasma membrane	51.97	53.85
CDX91384	Canola	plasma membrane	52.26	53.34
PGSC0003DMT400022983	Potato	plasma membrane	51.53	53.23
OQU76297	Sorghum	plasma membrane	45.27	52.98
OQU84848	Sorghum	plasma membrane	54.44	52.9
Bra005168.1-P	Field mustard	plasma membrane	51.82	52.9
PGSC0003DMT400052365	Potato	plasma membrane	50.95	52.55
AT2G37710.1	Thale cress	plasma membrane	51.24	52.15
OQU88397	Sorghum	cytosol, plasma membrane, plastid	49.34	51.68
PGSC0003DMT400022743	Potato	plasma membrane	50.22	51.65
Solyc09g011990.1.1	Tomato	plasma membrane	50.22	51.65
CDY65835	Canola	plasma membrane	49.34	51.44
Solyc09g012000.1.1	Tomato	plasma membrane	49.93	51.27
CDY21254	Canola	plasma membrane	48.47	51.15
AT3G53810.1	Thale cress	plasma membrane	50.22	50.96
Bra035326.1-P	Field mustard	plasma membrane	49.2	50.37
CDY55369	Canola	plasma membrane	48.33	49.55
AT4G02420.1	Thale cress	plasma membrane	48.03	49.33
Bra018553.1-P	Field mustard	plasma membrane	47.6	49.03
CDY02414	Canola	plasma membrane	42.07	48.98
AT4G02410.1	Thale cress	plasma membrane	47.89	48.81
Bra000881.1-P	Field mustard	plasma membrane	47.16	48.0
CDX90939	Canola	plasma membrane	46.0	47.81
EES17246	Sorghum	plasma membrane	47.31	46.9
Bra000880.1-P	Field mustard	plasma membrane	45.56	46.1
EER94566	Sorghum	plasma membrane	45.12	45.79
KXG37241	Sorghum	mitochondrion	47.45	45.22
Solyc09g011060.2.1	Tomato	plasma membrane	50.22	41.47
GSMUA_Achr9P09920_001	Banana	plasma membrane	41.05	29.75
OQU92890	Sorghum	plasma membrane	55.31	28.59
GSMUA_Achr9P10000_001	Banana	cytosol	40.61	14.55

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	UniProt:A0A1B6QKM2	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	EnsemblPlants:KXG38456	ProteinID:KXG38456	ProteinID:KXG38456.1	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom
PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007
PANTHER:PTHR27007:SF31	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G237100	SUPFAM:SSF49899
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081AE5D4	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:23971264..23973327

Molecular Weight (calculated)

74427.6 Da

IEP (calculated)

6.620

GRAVY (calculated)

-0.018

Length

687 amino acids

Sequence
(BLAST)

001: MRATAGLPFL LLLFHLHGLS HAAAPAAGGG GDGQFTYNGF TGAGLDLDGM AVVEPDGKLM LTNVTSQLKG HAFHPAPLRF HDRASAASAQ NRTARSFSTT
101: FVFAIVSDYV TVSGNGLAFF VAPSKNLSAA SPSQFLGLFN NQNNGNATNH VFAVELDTIL NPEFRDINSN HVGVDINGLV SLAAEPAGYY ADDTDGPAFR
201: NLSLFSGDAM QTWVDYDGRA AVLNVTLAPV EAPKPKKPLI SVAVDLSAVV NDTAYVGLSS STGPFHTRHY VLGWSFAVDG AAPTLDYTKL PRMSRVVTKR
301: QSKALDVVLP VAMPLLALAV LACVSLLAWR RFRYAELREE WEVEFGPHRF AYKDLFHATD GFDGNHLLGV GGFGRVYKGV LPASKTEVAV KIVSHDATQG
401: MKQFVAEVVS IGRLRHRNVV QLLGYCRRKG ELLLVYDYMP NGSLDRWLYD HGTPPLSWEQ RLRTIRGVAA GLLYLHEDWE QVVIHRDVKA SNVLLDGEMN
501: ARLGDFGLAR LYERGAGPQS THVVGTMGYL APELAHTRRV TPATDVFAFG SFVLEVACGR RPIERGDNDG RFLLVDWVLE LWHMGALADA ADTRLCGDYP
601: AEETELVLKL GLLCSHPVPA ARPSMRQVVQ YLDGDAPLPE PPASYQSFTV LAMMQNQGFD SYAASYPSSS ATVTSAGAMS SEHSGGR

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.