CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	EES01631	AT2G41090.1	17360592
AT4G02410.1	EES09201	AT2G41090.1	17360592
AT4G02410.1	EES16322	AT2G41090.1	17360592
AT4G02410.1	OQU78227	AT2G41090.1	17360592
AT4G02410.1	EES01631	AT2G41100.1	17360592
AT4G02410.1	EES09201	AT2G41100.1	17360592
AT4G02410.1	EES16322	AT2G41100.1	17360592
AT4G02410.1	OQU78227	AT2G41100.1	17360592
AT4G02410.1	KXG37587	AT4G14640.1	17360592
AT4G02410.1	KXG37588	AT4G14640.1	17360592
AT4G02410.1	EES01631	AT5G21274.1	17360592
AT4G02410.1	EES09201	AT5G21274.1	17360592
AT4G02410.1	EES16322	AT5G21274.1	17360592
AT4G02410.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78436	Sorghum	cytosol	83.07	81.63
Zm00001d037398_P001	Maize	plasma membrane	89.59	74.82
OQU88393	Sorghum	cytosol	56.26	66.46
HORVU7Hr1G028730.4	Barley	plasma membrane	78.84	64.97
HORVU7Hr1G000830.1	Barley	plasma membrane	74.25	60.49
TraesCS7A01G139900.1	Wheat	vacuole	45.15	55.77
KXG24408	Sorghum	plasma membrane	64.2	54.9
EER93380	Sorghum	plasma membrane	65.78	54.61
CDX91325	Canola	cytosol, mitochondrion	25.04	53.79
KXG22552	Sorghum	plasma membrane	59.44	53.49
KXG19863	Sorghum	plasma membrane	62.61	53.14
EER97934	Sorghum	plasma membrane	64.02	52.99
OQU82016	Sorghum	plasma membrane	64.02	52.53
OQU88865	Sorghum	plasma membrane	52.73	52.18
EER98367	Sorghum	plasma membrane	61.55	52.01
OQU76282	Sorghum	plasma membrane	58.2	51.97
KXG24409	Sorghum	plasma membrane	61.2	51.95
EER97932	Sorghum	plasma membrane	63.67	51.87
OQU76281	Sorghum	plasma membrane	62.26	51.31
EER95837	Sorghum	plasma membrane	60.49	51.04
OQU76297	Sorghum	plasma membrane	52.56	50.77
OQU88397	Sorghum	cytosol, plasma membrane, plastid	57.32	49.54
EES12555	Sorghum	plasma membrane	58.91	49.48
KXG34333	Sorghum	plasma membrane	61.73	48.81
EER99594	Sorghum	plasma membrane	58.55	48.54
OQU90148	Sorghum	plasma membrane	58.38	48.53
EER90817	Sorghum	plasma membrane	54.67	48.14
KRH49145	Soybean	plasma membrane	56.61	48.13
KRH00016	Soybean	plasma membrane	56.61	48.13
EER94173	Sorghum	plasma membrane	59.26	47.86
EER93379	Sorghum	plasma membrane	56.97	47.57
PGSC0003DMT400052365	Potato	plasma membrane	55.73	47.45
VIT_08s0007g00810.t01	Wine grape	plasma membrane	56.79	47.35
OQU84848	Sorghum	plasma membrane	58.2	46.68
AT2G37710.1	Thale cress	plasma membrane	55.56	46.67
CDX91384	Canola	plasma membrane	55.38	46.66
PGSC0003DMT400022983	Potato	plasma membrane	54.67	46.62
KXG38456	Sorghum	plasma membrane	56.44	46.58
Bra005168.1-P	Field mustard	plasma membrane	55.03	46.36
AT3G53810.1	Thale cress	plasma membrane	55.2	46.23
CDY65835	Canola	plasma membrane	52.56	45.22
CDY21254	Canola	plasma membrane	51.85	45.16
EES07549	Sorghum	cytosol, plasma membrane, plastid	51.5	44.65
Bra035326.1-P	Field mustard	plasma membrane	52.56	44.41
AT4G02410.1	Thale cress	plasma membrane	52.73	44.36
Solyc09g011990.1.1	Tomato	plasma membrane	52.2	44.31
Solyc09g012000.1.1	Tomato	plasma membrane	52.2	44.25
AT4G02420.1	Thale cress	plasma membrane	51.68	43.8
PGSC0003DMT400022743	Potato	plasma membrane	51.32	43.56
CDX90939	Canola	plasma membrane	50.62	43.42
Bra000881.1-P	Field mustard	plasma membrane	51.5	43.26
Bra018553.1-P	Field mustard	plasma membrane	50.62	43.03
CDY02414	Canola	plasma membrane	44.44	42.71
CDY55369	Canola	plasma membrane	50.26	42.54
Bra000880.1-P	Field mustard	plasma membrane	49.91	41.68
KXG37241	Sorghum	mitochondrion	47.97	37.73
EER94566	Sorghum	plasma membrane	44.97	37.67
EES17246	Sorghum	plasma membrane	46.03	37.66
Solyc09g011060.2.1	Tomato	plasma membrane	50.79	34.62
GSMUA_Achr9P09920_001	Banana	plasma membrane	44.62	26.69
OQU92890	Sorghum	plasma membrane	59.08	25.21
GSMUA_Achr9P10000_001	Banana	cytosol	43.03	12.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	UniProt:A0A1W0VSQ0	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	EnsemblPlants:OQU76295	ProteinID:OQU76295	ProteinID:OQU76295.1
PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007
PANTHER:PTHR27007:SF14	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3010G126800	SUPFAM:SSF49899
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0009DC935D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:16040372..16042635

Molecular Weight (calculated)

63006.6 Da

IEP (calculated)

7.090

GRAVY (calculated)

-0.174

Length

567 amino acids

Sequence
(BLAST)

001: MRSTQPHGDS ASPLDFSGAQ HSQYLGLLNK TSDGKASNHI FAVELDSSQN TEFNDIDDNH IGININSLTS FQSRSAAFYD DKNGKFQNLS LVSRKEMQVW
101: VDYNGDTAQI NVTLAPLRVD KPSKPLLSAT YNLSTVLEDP SYIGFSASTG PINSLYCVLG WSLGINSPAP LIDIAKLPKL PDVGPKPLSK VLEIILPIVT
201: ATFIILLGTT VILFVRRRMK YAEVQEDWEA EFGPHRFPYK DLFHATDGFK NKNLLGLGGF GKVYKGVLPT SKLEVAVKRV SHESKQGMKE FIAEIVSIGR
301: LRHRNLVQLL GYCRRKGELL LVYDYMSNGS LDKYLHCEED KPTLNWAQRF QIIKGVASGL LYLHERWEKV VIHRDIKASN VLLDSEMNGR LGDFGLARLY
401: DHGTNPQTTH VVGTMGYIAP ELARTGKATP LTDVYAFGIF ILEVTCGQRP INSHAEDSSQ ILIDWVVKHW QEGSLTYTMD TRLQGSYNAD EVCLALNLGL
501: MCAHPVCNAR PSMRQVIKYL NGEMPLPEMM PTNLSYSVLA LMQNEGFDQF TSIVGSSSIT SSLSSGR

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.