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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 EES01631 AT2G41090.1 17360592
AT4G02410.1 EES09201 AT2G41090.1 17360592
AT4G02410.1 EES16322 AT2G41090.1 17360592
AT4G02410.1 OQU78227 AT2G41090.1 17360592
AT4G02410.1 EES01631 AT2G41100.1 17360592
AT4G02410.1 EES09201 AT2G41100.1 17360592
AT4G02410.1 EES16322 AT2G41100.1 17360592
AT4G02410.1 OQU78227 AT2G41100.1 17360592
AT4G02410.1 KXG37587 AT4G14640.1 17360592
AT4G02410.1 KXG37588 AT4G14640.1 17360592
AT4G02410.1 EES01631 AT5G21274.1 17360592
AT4G02410.1 EES09201 AT5G21274.1 17360592
AT4G02410.1 EES16322 AT5G21274.1 17360592
AT4G02410.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021897_P001 Maize plasma membrane 90.76 90.9
TraesCS2A01G186500.1 Wheat cytosol 35.48 80.94
TraesCS2B01G221100.1 Wheat plasma membrane 76.1 76.44
TraesCS2D01G201400.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 75.95 76.29
TraesCS2A01G186100.1 Wheat plasma membrane 59.53 75.89
TraesCS2B01G158800.1 Wheat plasma membrane 70.53 75.16
HORVU2Hr1G037210.1 Barley plasma membrane 73.75 74.08
TraesCS7A01G085600.1 Wheat plasma membrane 73.02 74.0
TraesCS7D01G080500.1 Wheat plasma membrane 72.87 73.85
HORVU7Hr1G019390.1 Barley plasma membrane 73.61 71.1
EES12555 Sorghum plasma membrane 64.52 65.19
TraesCS2B01G106200.1 Wheat plasma membrane 63.2 62.92
EER90817 Sorghum plasma membrane 58.36 61.8
OQU88393 Sorghum cytosol 43.26 61.46
EER93380 Sorghum plasma membrane 60.41 60.32
EER98367 Sorghum plasma membrane 58.8 59.76
EER94173 Sorghum plasma membrane 61.14 59.4
CDX91325 Canola cytosol, mitochondrion 22.87 59.09
EES07549 Sorghum cytosol, plasma membrane, plastid 56.3 58.72
EER99594 Sorghum plasma membrane 58.65 58.48
EER97934 Sorghum plasma membrane 58.65 58.39
OQU76295 Sorghum cytosol, nucleus, plastid 48.53 58.38
OQU82016 Sorghum plasma membrane 58.8 58.03
EER95837 Sorghum plasma membrane 57.04 57.89
KXG38456 Sorghum plasma membrane 58.21 57.79
OQU78436 Sorghum cytosol 48.39 57.19
TraesCS2D01G088500.1 Wheat plasma membrane 57.62 56.71
OQU76282 Sorghum plasma membrane 52.64 56.54
KXG24408 Sorghum plasma membrane 54.84 56.41
HORVU2Hr1G014930.1 Barley plastid 61.44 56.39
OQU76281 Sorghum plasma membrane 56.74 56.25
KRH49145 Soybean plasma membrane 54.69 55.92
KXG19863 Sorghum plasma membrane 54.55 55.69
KXG24409 Sorghum plasma membrane 54.25 55.39
OQU88865 Sorghum plasma membrane 46.48 55.32
KRH00016 Soybean plasma membrane 53.96 55.17
EER97932 Sorghum plasma membrane 56.16 55.03
KXG34333 Sorghum plasma membrane 57.62 54.81
EER93379 Sorghum plasma membrane 54.25 54.49
CDY65835 Canola plasma membrane 52.49 54.32
Bra005168.1-P Field mustard plasma membrane 53.37 54.09
AT2G37710.1 Thale cress plasma membrane 53.52 54.07
KXG22552 Sorghum plasma membrane 49.85 53.97
CDX91384 Canola plasma membrane 53.23 53.94
OQU84848 Sorghum plasma membrane 55.87 53.89
VIT_08s0007g00810.t01 Wine grape plasma membrane 53.67 53.82
OQU76297 Sorghum plasma membrane 46.04 53.49
PGSC0003DMT400052365 Potato plasma membrane 51.91 53.15
PGSC0003DMT400022983 Potato plasma membrane 51.76 53.08
AT3G53810.1 Thale cress plasma membrane 52.35 52.73
CDY55369 Canola plasma membrane 51.61 52.54
CDY21254 Canola plasma membrane 50.15 52.53
Solyc09g011990.1.1 Tomato plasma membrane 51.03 52.1
Bra018553.1-P Field mustard plasma membrane 50.88 52.02
OQU88397 Sorghum cytosol, plasma membrane, plastid 49.85 51.83
PGSC0003DMT400022743 Potato plasma membrane 50.73 51.8
AT4G02420.1 Thale cress plasma membrane 50.44 51.42
Bra035326.1-P Field mustard plasma membrane 50.59 51.42
CDX90939 Canola plasma membrane 49.71 51.29
Bra000881.1-P Field mustard plasma membrane 50.59 51.11
AT4G02410.1 Thale cress plasma membrane 50.44 51.04
CDY02414 Canola plasma membrane 43.7 50.51
Solyc09g012000.1.1 Tomato plasma membrane 49.12 50.07
Bra000880.1-P Field mustard plasma membrane 48.24 48.45
KXG37241 Sorghum mitochondrion 48.83 46.19
EER94566 Sorghum plasma membrane 44.28 44.61
EES17246 Sorghum plasma membrane 44.13 43.43
Solyc09g011060.2.1 Tomato plasma membrane 50.59 41.47
OQU92890 Sorghum plasma membrane 57.18 29.35
GSMUA_Achr9P09920_001 Banana plasma membrane 39.3 28.27
GSMUA_Achr9P10000_001 Banana cytosol 42.23 15.02
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A1W0W6V3InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domEnsemblPlants:OQU90148ProteinID:OQU90148ProteinID:OQU90148.1
PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007
PANTHER:PTHR27007:SF133InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3002G350901SUPFAM:SSF49899
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0009DC8DBBSEG:seg
Description
hypothetical protein
Coordinates
chr2:-:71498496..71500900
Molecular Weight (calculated)
74548.5 Da
IEP (calculated)
6.862
GRAVY (calculated)
0.011
Length
682 amino acids
Sequence
(BLAST)
001: MLFQTFHLAT LLILILVPVG RCANDATAGS DDEQFVYNGF KGANLTLNGD GASTVTPNGL LMLTNGTIQM KGHAFHPSPL PFRDPGAQNA TAVRSFSTTF
101: VFAIFGPYID LSSHGLAFVV SSDMAVLSTA LPGQFLGLLN STDNGNSSTH VFAVELDTLF NADFLDINSN HVGVDVDSLV SRAAADAGYY DDGTGQFRNL
201: SLVSRTAMQV WVDYDSGATQ VTVTMAPLGL ARPKKPLLQT TVDLSGVVQD TPAYVGFTSA TGILFSRHFV LGWSFAFDGP APALNISALP ALPPAGPKPR
301: SKVLNIVLPI ATATLVFAVG VLIYAVVRRR IKFAELREDW ETAFGPHRFS YKDLYHATGG FSDKRLLGAG GFGSVYRGVL RKSNTEVAVK KVSHESKQGM
401: KEFIAEVASM GRLRHRNLVQ LLGYCRRKGE LLLVYDYMPN GSLDKYLYDR SKGALEWPQR FHIIRGVASG LLYLHEDWEQ VVIHRDVKAS NVLIDGDMNG
501: RLGDFGLARL YDHGTDAHTT HVVGTMGYLA PELGHTGKAT PATDVFAFGA FLLEVTCGRR PIQQDEHNNR TVLVDWVTER WRRGLIIDAA DTMIPDGFNP
601: DEVSLVLKLG LLCSHPLPNA RPTMRQVMQY LDGDMILPDL SPEYFGFTVM KRMYSMELSQ DTMPCVSSTT TMGVISDLSR GR
Best Arabidopsis Sequence Match ( AT4G02410.1 )
(BLAST)
001: MFFKLFTIFF FFIILLSKPL NSSSQSLNFT YNSFHRPPTN ISIQGIATVT SNGILKLTDK TVISTGHAFY TEPIRFKDSP NDTVSSFSTT FVIGIYSGIP
101: TISGHGMAFF IAPNPVLSSA MASQYLGLFS STNNGNDTNH ILAVEFDTIM NPEFDDTNDN HVGININSLT SVKSSLVGYW DEINQFNNLT LISRKRMQVW
201: VDYDDRTNQI DVTMAPFGEV KPRKALVSVV RDLSSVFLQD MYLGFSAATG YVLSEHFVFG WSFMVKGKTA PPLTLSKVPK FPRVGPTSLQ RFYKNRMPLF
301: SLLLIPVLFV VSLIFLVRFI VRRRRKFAEE FEDWETEFGK NRLRFKDLYY ATKGFKDKDL LGSGGFGRVY RGVMPTTKKE IAVKRVSNES RQGLKEFVAE
401: IVSIGRMSHR NLVPLLGYCR RRDELLLVYD YMPNGSLDKY LYDCPEVTLD WKQRFNVIIG VASGLFYLHE EWEQVVIHRD IKASNVLLDA EYNGRLGDFG
501: LARLCDHGSD PQTTRVVGTW GYLAPDHVRT GRATTATDVF AFGVLLLEVA CGRRPIEIEI ESDESVLLVD SVFGFWIEGN ILDATDPNLG SVYDQREVET
601: VLKLGLLCSH SDPQVRPTMR QVLQYLRGDA TLPDLSPLDF RGSGKMLGMN HRFSESCTFS SGSSIAYSIV SGGR
Arabidopsis Description
LECRK43L-type lectin-domain containing receptor kinase IV.3 [Source:UniProtKB/Swiss-Prot;Acc:O81292]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.