Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 EES01631 AT2G41090.1 17360592
AT4G02410.1 EES09201 AT2G41090.1 17360592
AT4G02410.1 EES16322 AT2G41090.1 17360592
AT4G02410.1 OQU78227 AT2G41090.1 17360592
AT4G02410.1 EES01631 AT2G41100.1 17360592
AT4G02410.1 EES09201 AT2G41100.1 17360592
AT4G02410.1 EES16322 AT2G41100.1 17360592
AT4G02410.1 OQU78227 AT2G41100.1 17360592
AT4G02410.1 KXG37587 AT4G14640.1 17360592
AT4G02410.1 KXG37588 AT4G14640.1 17360592
AT4G02410.1 EES01631 AT5G21274.1 17360592
AT4G02410.1 EES09201 AT5G21274.1 17360592
AT4G02410.1 EES16322 AT5G21274.1 17360592
AT4G02410.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU76295 Sorghum cytosol, nucleus, plastid 66.46 56.26
TraesCS2A01G214100.1 Wheat plasma membrane 78.54 56.1
TraesCS2D01G219900.1 Wheat plasma membrane 77.71 55.51
OQU78436 Sorghum cytosol 64.79 53.9
CDX91325 Canola cytosol, mitochondrion 29.38 53.41
Os07t0130400-01 Rice plasma membrane 75.83 52.45
EER97932 Sorghum plasma membrane 71.88 49.57
EER93380 Sorghum plasma membrane 70.0 49.19
KXG22552 Sorghum plasma membrane 63.75 48.57
EER97934 Sorghum plasma membrane 69.17 48.47
KXG24409 Sorghum plasma membrane 67.29 48.35
OQU76281 Sorghum plasma membrane 68.75 47.97
EER98367 Sorghum plasma membrane 66.67 47.69
OQU82016 Sorghum plasma membrane 67.92 47.18
KXG24408 Sorghum plasma membrane 63.75 46.15
KXG19863 Sorghum plasma membrane 63.75 45.81
EER95837 Sorghum plasma membrane 63.54 45.39
EES12555 Sorghum plasma membrane 63.12 44.89
OQU76282 Sorghum plasma membrane 58.54 44.25
EER99594 Sorghum plasma membrane 62.29 43.71
EER94173 Sorghum plasma membrane 63.33 43.3
OQU90148 Sorghum plasma membrane 61.46 43.26
KXG38456 Sorghum plasma membrane 61.46 42.94
OQU76297 Sorghum plasma membrane 52.29 42.76
EER90817 Sorghum plasma membrane 57.08 42.55
OQU88397 Sorghum cytosol, plasma membrane, plastid 58.12 42.53
OQU88865 Sorghum plasma membrane 50.21 42.06
KXG34333 Sorghum plasma membrane 62.5 41.84
EER93379 Sorghum plasma membrane 58.75 41.53
OQU84848 Sorghum plasma membrane 60.83 41.3
KRH00016 Soybean plasma membrane 57.29 41.23
KRH49145 Soybean plasma membrane 57.29 41.23
PGSC0003DMT400052365 Potato plasma membrane 57.08 41.14
EES07549 Sorghum cytosol, plasma membrane, plastid 55.42 40.67
VIT_08s0007g00810.t01 Wine grape plasma membrane 57.29 40.44
PGSC0003DMT400022983 Potato plasma membrane 55.62 40.15
Bra005168.1-P Field mustard plasma membrane 56.25 40.12
CDY65835 Canola plasma membrane 55.0 40.06
CDX91384 Canola plasma membrane 56.04 39.97
Solyc09g012000.1.1 Tomato plasma membrane 55.42 39.76
AT2G37710.1 Thale cress plasma membrane 55.62 39.56
AT3G53810.1 Thale cress plasma membrane 55.42 39.29
Solyc09g011990.1.1 Tomato plasma membrane 54.38 39.07
PGSC0003DMT400022743 Potato plasma membrane 54.17 38.92
CDY21254 Canola plasma membrane 52.08 38.4
Bra035326.1-P Field mustard plasma membrane 52.5 37.56
Bra018553.1-P Field mustard plasma membrane 52.08 37.48
CDY55369 Canola plasma membrane 52.08 37.31
CDX90939 Canola plasma membrane 51.25 37.22
CDY02414 Canola plasma membrane 45.42 36.95
AT4G02410.1 Thale cress plasma membrane 51.88 36.94
Bra000881.1-P Field mustard plasma membrane 51.46 36.59
AT4G02420.1 Thale cress plasma membrane 50.21 36.02
Bra000880.1-P Field mustard plasma membrane 49.79 35.2
EES17246 Sorghum plasma membrane 48.12 33.33
KXG37241 Sorghum mitochondrion 49.17 32.73
EER94566 Sorghum plasma membrane 46.04 32.64
Solyc09g011060.2.1 Tomato plasma membrane 54.58 31.49
GSMUA_Achr9P09920_001 Banana plasma membrane 43.33 21.94
OQU92890 Sorghum plasma membrane 60.0 21.67
GSMUA_Achr9P10000_001 Banana cytosol 40.83 10.22
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A1W0W219InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0030246InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domEnsemblPlants:OQU88393ProteinID:OQU88393
ProteinID:OQU88393.1PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27007PANTHER:PTHR27007:SF28InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3002G024300
SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0009DC9118SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:2259125..2260893
Molecular Weight (calculated)
53469.6 Da
IEP (calculated)
8.141
GRAVY (calculated)
-0.131
Length
480 amino acids
Sequence
(BLAST)
001: MQVWVDYDGE QKRVDVTMAP LRMAKPSRPL LSTAYDLSTV LTDVARVGFS SATGSFNSRH YVLGWSFAMD GPAPAIDIAK LPKLPRFGPK HRAKLAEIIP
101: PVATAAVILA VGAIAVLLVR RRLRYTEVRE DWEVEFGPHR FSYKDLFNAT EGFKNKNLLG VGGFGRVYKG VLPVSKMEIA VKKVSHDSKQ GMKEFIAEVV
201: SIGRLQHRNL VQLLGYCRRK GELLLVYEYM SNGSLDKHLY GGDQNHDMPI LNWDQRFRII KGIASGLLYL HEEWEKVIIH RDIKASNVLL DNDMEGRLGD
301: FGLARLYDHG TDPHTTHVVG TIGYLAPELG RSSKATPLSD VFAFGMFVLE VTCGQRPIRQ SSNGDQLLLV DWVVEHWHHG SLTDTVDARL HGSYNIDEAS
401: LALKIGLLCS HPLSSVRPSM RQVSKYLSGD IPVPELAPTH RSFESLALMQ NEGFDSYVMS YPSSMVTMTT MSSPSGEVIT
Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.