CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G184400.1	Wheat	plasma membrane	79.76	79.65
Os10t0533800-00	Rice	plasma membrane	78.43	76.07
TraesCS4D01G288200.1	Wheat	plasma membrane	66.77	67.26
Zm00001d043781_P001	Maize	plasma membrane	66.17	66.67
TraesCS4B01G289100.1	Wheat	plasma membrane	66.47	66.18
VIT_13s0067g01640.t01	Wine grape	vacuole	50.22	50.52
VIT_13s0067g01590.t01	Wine grape	plasma membrane, vacuole	48.89	49.11
EES17246	Sorghum	plasma membrane	47.71	46.61
PGSC0003DMT400068512	Potato	plasma membrane	46.23	46.51
EER90817	Sorghum	plasma membrane	44.02	46.27
OQU88393	Sorghum	cytosol	32.64	46.04
Solyc09g005000.1.1	Tomato	plasma membrane	45.49	45.7
EES12555	Sorghum	plasma membrane	45.2	45.33
KXG38456	Sorghum	plasma membrane	45.79	45.12
OQU76295	Sorghum	cytosol, nucleus, plastid	37.67	44.97
EER94173	Sorghum	plasma membrane	45.94	44.3
OQU90148	Sorghum	plasma membrane	44.61	44.28
EER93380	Sorghum	plasma membrane	44.46	44.07
OQU82016	Sorghum	plasma membrane	44.9	43.99
EER97934	Sorghum	plasma membrane	44.46	43.94
EER99594	Sorghum	plasma membrane	44.31	43.86
EES07549	Sorghum	cytosol, plasma membrane, plastid	42.1	43.58
OQU78436	Sorghum	cytosol	37.08	43.5
EER95837	Sorghum	plasma membrane	42.69	43.01
OQU76282	Sorghum	plasma membrane	40.33	42.99
KXG24409	Sorghum	plasma membrane	42.1	42.66
EER98367	Sorghum	plasma membrane	42.25	42.62
OQU76281	Sorghum	plasma membrane	43.13	42.44
EER97932	Sorghum	plasma membrane	43.57	42.39
KXG24408	Sorghum	plasma membrane	41.36	42.23
KXG34333	Sorghum	plasma membrane	44.61	42.12
OQU84848	Sorghum	plasma membrane	43.57	41.73
EER93379	Sorghum	plasma membrane	41.51	41.38
OQU88397	Sorghum	cytosol, plasma membrane, plastid	40.03	41.31
KXG22552	Sorghum	plasma membrane	38.4	41.27
KRH42204	Soybean	plasma membrane	40.47	41.14
KXG19863	Sorghum	plasma membrane	40.18	40.72
OQU76297	Sorghum	plasma membrane	35.01	40.37
OQU88865	Sorghum	plasma membrane	33.97	40.14
KXG37241	Sorghum	mitochondrion	42.1	39.53
OQU92890	Sorghum	plasma membrane	43.13	21.97

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	EntrezGene:8058795	UniProt:C5WTJ3
InterPro:ConA-like_dom_sf	EnsemblPlants:EER94566	ProteinID:EER94566	ProteinID:EER94566.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27007	PANTHER:PTHR27007:SF60	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G310800
SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001A83030	RefSeq:XP_002467568.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:59719766..59724489

Molecular Weight (calculated)

73699.7 Da

IEP (calculated)

8.065

GRAVY (calculated)

0.068

Length

677 amino acids

Sequence
(BLAST)

001: MSPICIYLFG CLAVIFLSHH RLLYSVAAVD FLYNGFQHAA HLSLDGSASI LRGGALQLTN DSNNLMGHAF FDSPVRALSG NNAVVSFSTA FVFDIVTVGH
101: SGGHGLAFVV AASKVLPGAR AEQYLGLLGK NNLGNSSNHV FAVEFDTVQA NGLLNETNGN HVGVDLNSLV SNVSEPAAYF TDDDGKNISV TLESAQRIQA
201: WVDYDGSTKV LNVTIAPVSW QAGRPHRPLI SHVIDLVPIF KQDMYVGFSA ATGKLASSHY ILAWSFRTGG EAQAIDLSRL PNVPKPPAPP PSMSTVIKIV
301: AVSCVATLTT IVLAIASALW LRRRAILAET LEEWERDHPH RLPYKQLYKA TKGFNNSELL GAGGFGQVYR GVLRRRRSGE VVVAIKRISS NGTQGMREFV
401: AEVASLGRMR HRHLVELRGW CKRGQDLLLV YEFMPNGSLD AHLFGRAGTT GKPPALLAWE QRAMILRGVA SGLVYLHEEW EQVVVHRDVK ASNVLLGADL
501: GPRLGDFGLA RLYEHGADPT TTRIVGTLGY MAPELTVTAR ATKATDVFAF GALLLEVVCG RRPIDPVSGV NLLRWVRDLG ARGDLVRAVD ERLNGRYDME
601: EAKLLLWLGL MCSQTRPEAR PSIRQVCQYL DGEMEMQEAA VLVFSDVVSS FDFGSLPPTL TWSTCNTMSV GSLHSGR

Best Arabidopsis Sequence Match ( AT5G01550.1 )
(BLAST)

001: MFLMYRSLMG TARSIISFML VLFLLLTIPT RAQRTTTETP KTEFIFRGFS GNQSNIVTTG AATIKLDGLL RLTDRNSNVT GTSFYHKPVR LLETNTSSTN
101: STIRSFSTSF VFVIIPTSSS NGGFGFTFTL SPTPDRTGAE SAQYLGLLNK ANDGNSTNHV FAVEFDTVQG FKDGADRTGN HIGLNFNSLT SDVQEPVVYY
201: DNEDPNRKED FPLQSGDPIR AILDYDGPTQ TLNLTVYPAN LKSRPVRPLI SRPVPKLSQI VQEEMYVGFT AATGRDQSSA HYVMGWSFSS GGDLLTEDTL
301: DLLELPRPPP NTAKKRGYNS QVLALIVALS GVTVILLALL FFFVMYKKRL QQGEVLEDWE INHPHRLRYK DLYAATDGFK ENRIVGTGGF GTVFRGNLSS
401: PSSDQIAVKK ITPNSMQGVR EFIAEIESLG RLRHKNLVNL QGWCKQKNDL LLIYDYIPNG SLDSLLYSRP RQSGVVLSWN ARFKIAKGIA SGLLYLHEEW
501: EKVVIHRDIK PSNVLIEDDM NPRLGDFGLA RLYERGSQSN TTVVVGTIGY MAPELARNGK SSSASDVFAF GVLLLEIVSG RRPTDSGTFF LADWVMELHA
601: RGEILHAVDP RLGFGYDGVE ARLALVVGLL CCHQRPTSRP SMRTVLRYLN GDDDVPEIDN DWGYSDSSRS DLGSNFEGYV SSDRASSSVP SFSVTRVSSS
701: SVISGR

Arabidopsis Description

LECRKA4.2lectin receptor kinase a4.1 [Source:TAIR;Acc:AT5G01550]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.