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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, extracellular, nucleus, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 EES01631 AT2G41090.1 17360592
AT4G02410.1 EES09201 AT2G41090.1 17360592
AT4G02410.1 EES16322 AT2G41090.1 17360592
AT4G02410.1 OQU78227 AT2G41090.1 17360592
AT4G02410.1 EES01631 AT2G41100.1 17360592
AT4G02410.1 EES09201 AT2G41100.1 17360592
AT4G02410.1 EES16322 AT2G41100.1 17360592
AT4G02410.1 OQU78227 AT2G41100.1 17360592
AT4G02410.1 KXG37587 AT4G14640.1 17360592
AT4G02410.1 KXG37588 AT4G14640.1 17360592
AT4G02410.1 EES01631 AT5G21274.1 17360592
AT4G02410.1 EES09201 AT5G21274.1 17360592
AT4G02410.1 EES16322 AT5G21274.1 17360592
AT4G02410.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G191500.1 Wheat plasma membrane 74.17 70.19
HORVU6Hr1G053120.1 Barley plasma membrane 73.39 69.76
OQU88393 Sorghum cytosol 44.25 58.54
OQU76295 Sorghum cytosol, nucleus, plastid 51.97 58.2
EER97934 Sorghum plasma membrane 62.52 57.96
EER98367 Sorghum plasma membrane 60.47 57.23
KXG34333 Sorghum plasma membrane 64.09 56.76
KXG24408 Sorghum plasma membrane 59.21 56.71
KXG24409 Sorghum plasma membrane 59.37 56.44
EER97932 Sorghum plasma membrane 61.73 56.32
EER93380 Sorghum plasma membrane 60.16 55.93
OQU76281 Sorghum plasma membrane 60.47 55.81
OQU78436 Sorghum cytosol 50.71 55.81
OQU88865 Sorghum plasma membrane 49.61 54.97
EES12555 Sorghum plasma membrane 58.27 54.81
KXG19863 Sorghum plasma membrane 57.64 54.79
KXG22552 Sorghum plasma membrane 53.54 53.97
EER95837 Sorghum plasma membrane 56.85 53.72
OQU76297 Sorghum plasma membrane 49.61 53.66
EER90817 Sorghum plasma membrane 53.39 52.64
OQU90148 Sorghum plasma membrane 56.54 52.64
EER94173 Sorghum plasma membrane 58.11 52.56
EER93379 Sorghum plasma membrane 55.59 51.99
OQU82016 Sorghum plasma membrane 55.91 51.37
KXG38456 Sorghum plasma membrane 55.12 50.95
KRH49145 Soybean plasma membrane 53.23 50.67
EER99594 Sorghum plasma membrane 54.33 50.44
EES07549 Sorghum cytosol, plasma membrane, plastid 51.81 50.31
OQU84848 Sorghum plasma membrane 55.59 49.93
KRH00016 Soybean plasma membrane 52.44 49.92
Bra005168.1-P Field mustard plasma membrane 51.34 48.44
PGSC0003DMT400022983 Potato plasma membrane 50.71 48.42
VIT_08s0007g00810.t01 Wine grape plasma membrane 51.81 48.38
AT2G37710.1 Thale cress plasma membrane 51.34 48.3
CDX91384 Canola plasma membrane 51.18 48.29
Solyc09g011990.1.1 Tomato plasma membrane 50.71 48.2
PGSC0003DMT400052365 Potato plasma membrane 50.39 48.05
PGSC0003DMT400022743 Potato plasma membrane 49.61 47.16
OQU88397 Sorghum cytosol, plasma membrane, plastid 48.66 47.1
CDY21254 Canola plasma membrane 48.19 47.0
CDY65835 Canola plasma membrane 48.66 46.89
AT3G53810.1 Thale cress plasma membrane 49.92 46.82
CDY02414 Canola plasma membrane 43.46 46.78
Solyc09g012000.1.1 Tomato plasma membrane 48.98 46.49
Bra035326.1-P Field mustard plasma membrane 48.5 45.9
AT4G02410.1 Thale cress plasma membrane 48.5 45.7
AT4G02420.1 Thale cress plasma membrane 48.03 45.59
Bra018553.1-P Field mustard plasma membrane 47.24 44.98
CDY55369 Canola plasma membrane 47.24 44.78
CDX91325 Canola cytosol, mitochondrion 18.58 44.7
CDX90939 Canola plasma membrane 45.98 44.18
Bra000881.1-P Field mustard plasma membrane 46.61 43.85
Bra000880.1-P Field mustard plasma membrane 46.3 43.3
KXG37241 Sorghum mitochondrion 46.77 41.19
EER94566 Sorghum plasma membrane 42.99 40.33
EES17246 Sorghum plasma membrane 43.46 39.83
Solyc09g011060.2.1 Tomato plasma membrane 48.98 37.38
GSMUA_Achr9P09920_001 Banana plasma membrane 42.68 28.59
OQU92890 Sorghum plasma membrane 55.91 26.71
GSMUA_Achr9P10000_001 Banana cytosol 44.57 14.76
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20UniProt:A0A1W0VSL9InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Lectin_legB_Mn/Ca_BSInterPro:Legume_lectin_domEnsemblPlants:OQU76282ProteinID:OQU76282
ProteinID:OQU76282.1PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS00307
PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF134InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3010G124800SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A88EB6RefSeq:XP_002436919.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr10:+:15203779..15206424
Molecular Weight (calculated)
69080.1 Da
IEP (calculated)
6.905
GRAVY (calculated)
0.008
Length
635 amino acids
Sequence
(BLAST)
001: MLFVRLLLLI VFLGLHPQAS SDTTADDDQF VYSGFRGSAL TVDGTAAVTS DGVLLLTNGT AYLKGHAFHP TPLRLRDSPN GSVQSFSVAF VFGIVSVYPD
101: FSAHGMALLI APGKDFSSAL PAKYLGLTNV QNDGNASNHL LAVELDTIQS VEFKDINANH VGIDVNGLQS LRSYNAGYYD DGSGEFQNLK LISRQAMTVW
201: VDYSGDKKQI NVTLAPLLMA TRPARPLLSV SYDLSTVLTD IVYLGFTSAT GRVNSRHCVL GWSFGKNRPA PAIDVSKLPD LPRAGPKPGS KVLEIVLPIV
301: TGALVLCFGG AGVLLVRRRF RYAELREDWE VEFGPHRFSY KDLYQATDGF KDKNLLGEGG FGRVYKGVLV PSMLEVAVKR VSHESRQGMK EFVAEIASIG
401: RIRHRNLVQL LGYCRRKGLL YLHERWEKVV VHRDIKASNV LLDADMNAQL GDFGLARLYD HGTDSQTTHV VGTVGYLSPE LLRTGKASPL TDVFAFGIFL
501: MELTCGQKPI KENEQGGGGG GHVMLVDWVL QHWRNGSLVA TVDAGLRGEY DVGEAELVLK LGILCSHPFA NARPGMGQVM RYLDGVTPLP ELTPTDSSFD
601: VLAMMMQGED FGMSSFSHPD TVASFGTISN LSGGR
Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.