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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, nucleus, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d030759_P001 Maize plasma membrane 92.21 92.61
Os12t0574700-00 Rice plasma membrane 77.63 78.43
TraesCS5B01G084800.1 Wheat plasma membrane 77.34 77.34
TraesCS5D01G091000.1 Wheat plasma membrane 76.62 76.62
TraesCS5A01G081600.1 Wheat plasma membrane 76.62 76.4
HORVU5Hr1G020530.1 Barley plasma membrane 76.91 75.18
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 46.61 60.94
VIT_13s0019g02040.t01 Wine grape plasma membrane 54.83 55.96
KRH00017 Soybean plasma membrane 53.68 55.19
KRH49147 Soybean plasma membrane 53.54 55.13
Solyc05g053010.1.1 Tomato plasma membrane 53.68 53.91
PGSC0003DMT400069794 Potato plasma membrane 53.1 53.33
Solyc09g011070.1.1 Tomato plasma membrane 52.09 53.01
VIT_08s0007g00830.t01 Wine grape plasma membrane 52.53 52.6
KRH31001 Soybean plasma membrane 51.23 52.44
Solyc10g084860.1.1 Tomato plasma membrane 50.36 52.32
KRH75684 Soybean plasma membrane 51.52 51.97
PGSC0003DMT400028763 Potato plasma membrane 50.94 51.53
CDY02947 Canola plasma membrane 45.02 51.32
Bra003216.1-P Field mustard cytosol 47.62 51.16
AT3G55550.1 Thale cress plasma membrane 49.35 50.0
KRH65893 Soybean plasma membrane 41.99 49.41
Bra014736.1-P Field mustard plasma membrane 48.48 49.34
CDX76086 Canola plasma membrane 48.48 49.34
KRH65884 Soybean plasma membrane 50.94 49.1
OQU88393 Sorghum cytosol 33.33 48.12
EER94566 Sorghum plasma membrane 46.61 47.71
KXG38456 Sorghum plasma membrane 46.9 47.31
EER90817 Sorghum plasma membrane 43.72 47.05
EER93380 Sorghum plasma membrane 46.32 47.0
EES12555 Sorghum plasma membrane 45.74 46.96
OQU76295 Sorghum cytosol, nucleus, plastid 37.66 46.03
EER99594 Sorghum plasma membrane 45.02 45.61
EER94173 Sorghum plasma membrane 45.89 45.3
EER97934 Sorghum plasma membrane 44.59 45.11
OQU82016 Sorghum plasma membrane 44.59 44.72
EES07549 Sorghum cytosol, plasma membrane, plastid 41.85 44.34
EER93379 Sorghum plasma membrane 43.43 44.33
OQU78436 Sorghum cytosol 36.8 44.19
OQU90148 Sorghum plasma membrane 43.43 44.13
EER97932 Sorghum plasma membrane 44.16 43.97
KXG24409 Sorghum plasma membrane 42.14 43.71
OQU84848 Sorghum plasma membrane 44.59 43.71
KXG34333 Sorghum plasma membrane 45.02 43.51
OQU76282 Sorghum plasma membrane 39.83 43.46
KXG24408 Sorghum plasma membrane 41.56 43.44
OQU76281 Sorghum plasma membrane 42.86 43.17
EER98367 Sorghum plasma membrane 41.7 43.07
EER95837 Sorghum plasma membrane 41.56 42.86
KXG22552 Sorghum plasma membrane 38.82 42.7
OQU88397 Sorghum cytosol, plasma membrane, plastid 39.97 42.23
OQU88865 Sorghum plasma membrane 34.63 41.88
KXG19863 Sorghum plasma membrane 40.12 41.62
KXG37241 Sorghum mitochondrion 42.86 41.19
OQU76297 Sorghum plasma membrane 34.63 40.89
OQU92890 Sorghum plasma membrane 42.28 22.05
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20EntrezGene:8068122UniProt:C5YQC0
InterPro:ConA-like_dom_sfEnsemblPlants:EES17246ProteinID:EES17246ProteinID:EES17246.1GO:GO:0000166GO:GO:0002229
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0009605GO:GO:0009607GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246GO:GO:0042742InterPro:IPR000719
InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF27InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3008G139600SUPFAM:SSF49899SUPFAM:SSF56112unigene:Sbi.14802InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A87FD8RefSeq:XP_002443408.1SEG:seg::
Description
hypothetical protein
Coordinates
chr8:-:57040020..57044866
Molecular Weight (calculated)
74496.6 Da
IEP (calculated)
8.990
GRAVY (calculated)
-0.059
Length
693 amino acids
Sequence
(BLAST)
001: MSSSKKPKPP ILLSFLFLLA SLAVAASQEF TYKGFSASGA GKNPSLSLNG TSATDVLPSG VLRLTNETSR LLGHAFYPAP LRFLDRPNGT AVSFSTQFAF
101: TIAPEFPTLG GHGFAFVVAP DPRMPGALPS QYLGLLSAAD VGNATNHLFA VEFDTVQDFE FDDVNGNHVG VNLNSLISNA SAKADPLNLK AGDTTAWIDY
201: DGAAGLLNVS IANGTAGKPA APLISFRVDL SGVFREQMYV GFSASTGVLA SSHYVRGWSF RLGGGAAPAL DLASLPSLPR IKSGRNRTSL ILAVAFSAFV
301: ALVVLAGAGA YGAYRYKNRD IIEPWELDYG PHRFKYAELR RATRGFRERE LLGSGGFGKV YRGVLRGKSG ETVAVKRVNH ESRQGLREFV AEIASIGRLR
401: HRNLVQLQGW CRRRGDLLLV YDYMPNGSLD RHLFGDHLKA SRLTWPVRHR ILRDVASALL YLHEGWESVV LHRDVKASNV LLDADMSARL GDFGLAKLHE
501: RGANPSTTRV VGTLGYLAPE LTRTGKATAA ADVFAFGALV LEVVAGRRPI EPRAEPEELV LSEWAWERYA AGEVEKVVDA RLAGTYDFAE AAAAVKVGLW
601: CSHPVAASRP TMREVARYLD GGEAGEVPEP PPPPPMPPAY SGEVGFDDFV HSYPSSSFER AAAAGGGWDG GTQTSVATFP FSPLSMRSSH VSM
Best Arabidopsis Sequence Match ( AT3G55550.1 )
(BLAST)
001: MSQTFAVILL LLIFLTHLVS SLIQDFSFIG FKKASPNLTL NGVAEIAPTG AIRLTTETQR VIGHAFYSLP IRFKPIGVNR ALSFSTSFAI AMVPEFVTLG
101: GHGLAFAITP TPDLRGSLPS QYLGLLNSSR VNFSSHFFAV EFDTVRDLEF EDINDNHVGI DINSMESSIS TPAGYFLANS TKKELFLDGG RVIQAWIDYD
201: SNKKRLDVKL SPFSEKPKLS LLSYDVDLSS VLGDEMYVGF SASTGLLASS HYILGWNFNM SGEAFSLSLP SLPRIPSSIK KRKKKRQSLI LGVSLLCSLL
301: IFAVLVAASL FVVRKVKDED RVEEWELDFG PHRFSYRELK KATNGFGDKE LLGSGGFGKV YKGKLPGSDE FVAVKRISHE SRQGVREFMS EVSSIGHLRH
401: RNLVQLLGWC RRRDDLLLVY DFMPNGSLDM YLFDENPEVI LTWKQRFKII KGVASGLLYL HEGWEQTVIH RDIKAANVLL DSEMNGRVGD FGLAKLYEHG
501: SDPGATRVVG TFGYLAPELT KSGKLTTSTD VYAFGAVLLE VACGRRPIET SALPEELVMV DWVWSRWQSG DIRDVVDRRL NGEFDEEEVV MVIKLGLLCS
601: NNSPEVRPTM RQVVMYLEKQ FPSPEVVPAP DFLDANDSMC LDERSGSAGE FEDFVDSARF YSGPNETTTS SIFSFSGKTR TDPR
Arabidopsis Description
LECRKS4L-type lectin-domain containing receptor kinase S.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2S4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.