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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G084800.1 Wheat plasma membrane 82.36 81.53
TraesCS5D01G091000.1 Wheat plasma membrane 81.78 80.95
TraesCS5A01G081600.1 Wheat plasma membrane 81.34 80.29
HORVU5Hr1G020530.1 Barley plasma membrane 81.92 79.27
Zm00001d030759_P001 Maize plasma membrane 78.57 78.12
EES17246 Sorghum plasma membrane 78.43 77.63
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 47.23 61.13
KRH49147 Soybean plasma membrane 57.87 58.99
KRH00017 Soybean plasma membrane 57.43 58.46
VIT_13s0019g02040.t01 Wine grape plasma membrane 56.12 56.7
KRH75684 Soybean plasma membrane 55.25 55.17
Solyc05g053010.1.1 Tomato plasma membrane 55.25 54.93
VIT_08s0007g00830.t01 Wine grape plasma membrane 55.39 54.91
Solyc09g011070.1.1 Tomato plasma membrane 54.37 54.77
PGSC0003DMT400069794 Potato plasma membrane 54.81 54.49
Solyc10g084860.1.1 Tomato plasma membrane 52.48 53.97
KRH31001 Soybean plasma membrane 53.21 53.91
CDY02947 Canola plasma membrane 47.67 53.78
PGSC0003DMT400028763 Potato plasma membrane 53.64 53.72
KRH65893 Soybean plasma membrane 45.63 53.14
Bra003216.1-P Field mustard cytosol 49.56 52.71
KRH65884 Soybean plasma membrane 55.1 52.57
AT3G55550.1 Thale cress plasma membrane 51.75 51.9
CDX76086 Canola plasma membrane 51.02 51.4
Bra014736.1-P Field mustard plasma membrane 51.02 51.4
Os10t0533800-00 Rice plasma membrane 49.13 48.28
Os04t0531400-01 Rice plasma membrane 44.02 47.48
Os10t0441900-01 Rice plasma membrane 47.67 47.32
Os07t0130100-01 Rice plasma membrane 46.36 46.7
Os07t0575600-02 Rice plasma membrane 46.79 46.05
Os10t0442000-01 Rice plasma membrane 46.94 45.54
Os02t0640500-01 Rice plasma membrane 44.46 45.25
Os03t0823000-01 Rice plasma membrane 46.21 45.22
Os07t0131500-00 Rice plasma membrane 41.4 44.65
Os07t0130200-01 Rice plasma membrane 44.75 44.62
Os03t0772600-01 Rice plasma membrane 30.47 44.47
Os04t0531500-01 Rice plasma membrane 46.79 43.61
Os07t0283125-00 Rice plasma membrane 42.13 43.2
Os07t0130400-01 Rice plasma membrane 43.29 42.8
Os09t0268000-00 Rice plasma membrane 40.67 41.77
Os07t0283050-00 Rice plasma membrane 40.52 41.55
Os07t0130800-01 Rice plasma membrane 40.82 40.0
Os07t0575750-00 Rice plasma membrane 39.8 39.45
Os09t0268100-00 Rice plasma membrane 27.41 38.84
Os02t0299000-00 Rice mitochondrion 32.51 37.73
Os02t0298200-01 Rice plasma membrane 32.51 37.73
Os07t0129800-00 Rice plasma membrane, vacuole 42.27 34.24
Os07t0131375-00 Rice plasma membrane 25.66 29.24
Os07t0575700-01 Rice plasma membrane 5.54 5.66
Os07t0129900-00 Rice plasma membrane 0.15 0.15
Protein Annotations
Gene3D:1.10.510.10EntrezGene:107276906MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20ProteinID:ABA98991.1
ProteinID:BAT17767.1InterPro:ConA-like_dom_sfProteinID:EAZ20959.1GO:GO:0000166GO:GO:0002229GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0009605GO:GO:0009607GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0030246GO:GO:0042742InterPro:IPR000719
InterPro:Kinase-like_dom_sfInterPro:Lectin_legB_Mn/Ca_BSInterPro:Legume_lectin_domEnsemblPlantsGene:Os12g0574700EnsemblPlants:Os12t0574700-00PFAM:PF00069
PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS00307PFscan:PS50011PANTHER:PTHR27007
PANTHER:PTHR27007:SF27InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q2QN91SMART:SM00220SUPFAM:SSF49899
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000680D94RefSeq:XP_015618465.1
SEG:seg:::::
Description
Similar to lectin-like receptor kinase 7. (Os12t0574700-00)
Coordinates
chr12:-:23717571..23719674
Molecular Weight (calculated)
72697.7 Da
IEP (calculated)
7.379
GRAVY (calculated)
0.053
Length
686 amino acids
Sequence
(BLAST)
001: MRHLAVVLLL LLLLAALAAS QEFTYSGFRN GGGGGGAGNS PNLTLNGVTE LRPDGILRLT NETSRLIGHA FYPSPLRLLA GGAAVSFSTE FAFAVVPEYP
101: KLGGHGLAFV VAPDPRLPGA LPSQYLGLLS AADVGNATNH VLAVEFDTVQ DFEFGDINDN HVGVDLNSLV SNASASAAPV NLKSGDTIVA WVDYDGGAKL
201: LNVSIAAASA SKPASPLISF HVDLSPIFLD QMFVGFSAST GLLASSHYLM GWSFKLGGGA APPLDVPSLP SLPRPAAGGK NRTSAILAAA FSAFVALVAL
301: AGAAAYAAHR YKNRDVVEPW ELDYGPHRYS YAELRRATRG FRDRELLGAG GFGKVYRGVL PGKPPRTVVA VKRVSHESRQ GLREFVAEIA SIGRLRHRNL
401: VQLQGWCRRR GDLLLVYDYM PNGSLDKHLF GDGLAAARLT WGARVKVLRD VAAALLYLHE GWERVVLHRD VKASNVLLDG DMSGRLGDFG LAKLHEHGAN
501: PSTTRVVGTL GYLAPELTRT GKATAAADVF AFGALALEVV AGRRPIEPRA PPEELVLAEW AWERYAAGEV GAVVDARLRG EFDAGEAEAA VKVALWCSHP
601: APAVRPTMRE VARYLDAGGA AEVPEPPPPP PPPPVSSGEV GYYDFVHSYP TSSYERAAAA ADGVTQTSVA TFPYSPLSMR SSHVSV
Best Arabidopsis Sequence Match ( AT3G55550.1 )
(BLAST)
001: MSQTFAVILL LLIFLTHLVS SLIQDFSFIG FKKASPNLTL NGVAEIAPTG AIRLTTETQR VIGHAFYSLP IRFKPIGVNR ALSFSTSFAI AMVPEFVTLG
101: GHGLAFAITP TPDLRGSLPS QYLGLLNSSR VNFSSHFFAV EFDTVRDLEF EDINDNHVGI DINSMESSIS TPAGYFLANS TKKELFLDGG RVIQAWIDYD
201: SNKKRLDVKL SPFSEKPKLS LLSYDVDLSS VLGDEMYVGF SASTGLLASS HYILGWNFNM SGEAFSLSLP SLPRIPSSIK KRKKKRQSLI LGVSLLCSLL
301: IFAVLVAASL FVVRKVKDED RVEEWELDFG PHRFSYRELK KATNGFGDKE LLGSGGFGKV YKGKLPGSDE FVAVKRISHE SRQGVREFMS EVSSIGHLRH
401: RNLVQLLGWC RRRDDLLLVY DFMPNGSLDM YLFDENPEVI LTWKQRFKII KGVASGLLYL HEGWEQTVIH RDIKAANVLL DSEMNGRVGD FGLAKLYEHG
501: SDPGATRVVG TFGYLAPELT KSGKLTTSTD VYAFGAVLLE VACGRRPIET SALPEELVMV DWVWSRWQSG DIRDVVDRRL NGEFDEEEVV MVIKLGLLCS
601: NNSPEVRPTM RQVVMYLEKQ FPSPEVVPAP DFLDANDSMC LDERSGSAGE FEDFVDSARF YSGPNETTTS SIFSFSGKTR TDPR
Arabidopsis Description
LECRKS4L-type lectin-domain containing receptor kinase S.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2S4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.