Factsheet for PGSC0003DMT400028763

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
extracellular 4
golgi 4
plasma membrane 8
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084860.1.1	Tomato	plasma membrane	91.97	94.45
KRH00017	Soybean	plasma membrane	65.69	66.77
KRH49147	Soybean	plasma membrane	65.4	66.57
KRH75684	Soybean	plasma membrane	63.8	63.61
VIT_08s0007g00830.t01	Wine grape	plasma membrane	64.23	63.58
KRH65884	Soybean	plasma membrane	63.07	60.08
KRH65893	Soybean	plasma membrane	51.24	59.59
PGSC0003DMT400069794	Potato	plasma membrane	59.71	59.28
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	42.48	54.91
TraesCS5B01G084800.1	Wheat	plasma membrane	54.45	53.82
Os12t0574700-00	Rice	plasma membrane	53.72	53.64
TraesCS5D01G091000.1	Wheat	plasma membrane	54.01	53.39
TraesCS5A01G081600.1	Wheat	plasma membrane	54.01	53.24
HORVU5Hr1G020530.1	Barley	plasma membrane	54.31	52.47
Zm00001d030759_P001	Maize	plasma membrane	51.97	51.59
EES17246	Sorghum	plasma membrane	51.53	50.94
PGSC0003DMT400052365	Potato	plasma membrane	49.49	50.9
PGSC0003DMT400022983	Potato	plasma membrane	49.05	50.53
PGSC0003DMT400022743	Potato	plasma membrane	45.84	47.01
PGSC0003DMT400068512	Potato	plasma membrane	45.55	46.36

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590810	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	UniProt:M1ARN3	PFAM:PF00069	PFAM:PF00139
EnsemblPlantsGene:PGSC0003DMG400011071	PGSC:PGSC0003DMG400011071	EnsemblPlants:PGSC0003DMT400028763	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27007	PANTHER:PTHR27007:SF27	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002966EC6	RefSeq:XP_006339016.1
SEG:seg	:	:	:	:	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400011071]

Coordinates

chr10:+:54303689..54306131

Molecular Weight (calculated)

76473.7 Da

IEP (calculated)

7.223

GRAVY (calculated)

-0.070

Length

685 amino acids

Sequence
(BLAST)

001: MFNFLTFLCF TISFSILASS QLDEFIFTKF NQPNNNITLS GVAKISQNGF IQLTNDTSRL IGHAFYSSPF HFKPTNASTF SFSTCFALAI VPEYPKLGGH
101: GLAFTISPSK DFSTALPSQY LGLLNASDIG NFSNHIFAVE FDTVRDFEFG DIDDNHVGVN INSLESNKSA AAGYFINDQN VKQDLNLKSG KVILVWVEYD
201: SVTKLVNVTL SPNSLKPKIP LLSYNFDVSP IFKENMYVGF SASTGLLASS HYILGWSFKL NGEAKSLDLD SLPSLPGPKK KHTRLIIVIS IIVFVFALIS
301: ILIAFYTIRR FKNADVIEQW ELEIGPHRYS YHELKKGTRG FKESELLGRG GFGKVYKGVL TNSKAEIAVK RISHESKQGL REFVSEIASI GRLRHRNLVQ
401: LLGWCRRRGD LLLVYEFMPN GSLDNFLFDE PKMVLKWEQR FKIIKGVASG LLYLHEGYEQ VVLHRDIKAS NVLLDGELNG KLGDFGLARL YEHGSNPSTT
501: KVVGTLGYLA PELPRTGRAT TKTDVFAFGA LLLEVVCGRR PIEHKAGPEE FVLVDLVWDK WREGKILDIV DYRLKGEYNE SEVLMVLKLG LMCSNNKPLA
601: RPSIRQVVRY FEGEIGMPEA PTTQGSDDLE GFGFDESERW NSLASTGIMI KSSSFTCLSN GDENSTNYVS FSTSPLPLLY SGECT

Best Arabidopsis Sequence Match ( AT3G55550.1 )
(BLAST)

001: MSQTFAVILL LLIFLTHLVS SLIQDFSFIG FKKASPNLTL NGVAEIAPTG AIRLTTETQR VIGHAFYSLP IRFKPIGVNR ALSFSTSFAI AMVPEFVTLG
101: GHGLAFAITP TPDLRGSLPS QYLGLLNSSR VNFSSHFFAV EFDTVRDLEF EDINDNHVGI DINSMESSIS TPAGYFLANS TKKELFLDGG RVIQAWIDYD
201: SNKKRLDVKL SPFSEKPKLS LLSYDVDLSS VLGDEMYVGF SASTGLLASS HYILGWNFNM SGEAFSLSLP SLPRIPSSIK KRKKKRQSLI LGVSLLCSLL
301: IFAVLVAASL FVVRKVKDED RVEEWELDFG PHRFSYRELK KATNGFGDKE LLGSGGFGKV YKGKLPGSDE FVAVKRISHE SRQGVREFMS EVSSIGHLRH
401: RNLVQLLGWC RRRDDLLLVY DFMPNGSLDM YLFDENPEVI LTWKQRFKII KGVASGLLYL HEGWEQTVIH RDIKAANVLL DSEMNGRVGD FGLAKLYEHG
501: SDPGATRVVG TFGYLAPELT KSGKLTTSTD VYAFGAVLLE VACGRRPIET SALPEELVMV DWVWSRWQSG DIRDVVDRRL NGEFDEEEVV MVIKLGLLCS
601: NNSPEVRPTM RQVVMYLEKQ FPSPEVVPAP DFLDANDSMC LDERSGSAGE FEDFVDSARF YSGPNETTTS SIFSFSGKTR TDPR

Arabidopsis Description

LECRKS4L-type lectin-domain containing receptor kinase S.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2S4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.