Factsheet for PGSC0003DMT400068512

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 9
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g005000.1.1	Tomato	plasma membrane	92.87	92.73
VIT_13s0067g01640.t01	Wine grape	vacuole	49.33	49.33
VIT_13s0067g01590.t01	Wine grape	plasma membrane, vacuole	48.59	48.52
TraesCS4D01G288200.1	Wheat	plasma membrane	47.1	47.17
PGSC0003DMT400052365	Potato	plasma membrane	46.21	46.7
PGSC0003DMT400022983	Potato	plasma membrane	45.91	46.47
Zm00001d043781_P001	Maize	plasma membrane	46.36	46.43
TraesCS4B01G289100.1	Wheat	plasma membrane	46.81	46.32
EER94566	Sorghum	plasma membrane	46.51	46.23
TraesCS1A01G184400.1	Wheat	plasma membrane	46.36	46.02
Os10t0533800-00	Rice	plasma membrane	47.25	45.56
PGSC0003DMT400028763	Potato	plasma membrane	46.36	45.55
PGSC0003DMT400069794	Potato	plasma membrane	46.36	45.22
PGSC0003DMT400022743	Potato	plasma membrane	43.39	43.71
KRH42204	Soybean	plasma membrane	40.71	41.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102605004	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	UniProt:M1CJ61	PFAM:PF00069	PFAM:PF00139
EnsemblPlantsGene:PGSC0003DMG400026646	PGSC:PGSC0003DMG400026646	EnsemblPlants:PGSC0003DMT400068512	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27007	PANTHER:PTHR27007:SF43	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002961561	RefSeq:XP_006359564.1
SEG:seg	:	:	:	:	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400026646]

Coordinates

chr9:-:10357987..10360275

Molecular Weight (calculated)

74473.1 Da

IEP (calculated)

6.830

GRAVY (calculated)

-0.091

Length

673 amino acids

Sequence
(BLAST)

001: MDNPYSLVIL ALIFFPILVR AQSFDFAYNG FNNSNIIRDG VAIINPSGAL KLTNRSQNVI GHAFHPNPVP IFNSSTKNVT SFSTYFVFAI VPLEKTSGGF
101: GFAFTLSPSP GFPGAQGDHF LGVLNNTNNR KDTNHIFMVE FDTVDGHDEG VDTDGNHIGI NINSMISIAS QPANYYVNGT SRTEEVHLQN GESIQAWIDY
201: DGMSKVVNVT ISPRTVPKPI RPLISEVVDL SPVLNQTMYA GFSAATGDKA SSHYILGWSF RLNGAADPLD LDNLPVAPPE VVRPSKNSHL KRALIGTFCS
301: VVILLLGAFY IYRRMRQHEV LEDWELDCPH RFRFRDLYKA TKGFKESELI GVGGFGAVYK GVLPTNGAEV AVKKISSNSL QGMREFAAEI ESLGRLRHKH
401: LINLQGWCKN KNDLLLVYDF VPNGSLDSLL YRQKRDIVLT WEQRFNIIKG IAAGLLYLHE EWEQVVIHRD VKSSNVLIDG EMNGRLGDFG LARLYDHGKN
501: SHTTNVVGTI GYIAPELTRT GKASTSTDVY AYGVLLLEVA SGRPPIVYEP GKGALVLADW VIECLQLGNV LDAVDQRLNS VYVDKEVQMI LRLGLVCSHP
601: RPEARPTMRQ IMKYLTGDES LPVFEQQLSC VGSDRVDEIT AKFLEVFSTD TINISRRSLS VGQISSSSLH SGR

Best Arabidopsis Sequence Match ( AT5G01550.1 )
(BLAST)

001: MFLMYRSLMG TARSIISFML VLFLLLTIPT RAQRTTTETP KTEFIFRGFS GNQSNIVTTG AATIKLDGLL RLTDRNSNVT GTSFYHKPVR LLETNTSSTN
101: STIRSFSTSF VFVIIPTSSS NGGFGFTFTL SPTPDRTGAE SAQYLGLLNK ANDGNSTNHV FAVEFDTVQG FKDGADRTGN HIGLNFNSLT SDVQEPVVYY
201: DNEDPNRKED FPLQSGDPIR AILDYDGPTQ TLNLTVYPAN LKSRPVRPLI SRPVPKLSQI VQEEMYVGFT AATGRDQSSA HYVMGWSFSS GGDLLTEDTL
301: DLLELPRPPP NTAKKRGYNS QVLALIVALS GVTVILLALL FFFVMYKKRL QQGEVLEDWE INHPHRLRYK DLYAATDGFK ENRIVGTGGF GTVFRGNLSS
401: PSSDQIAVKK ITPNSMQGVR EFIAEIESLG RLRHKNLVNL QGWCKQKNDL LLIYDYIPNG SLDSLLYSRP RQSGVVLSWN ARFKIAKGIA SGLLYLHEEW
501: EKVVIHRDIK PSNVLIEDDM NPRLGDFGLA RLYERGSQSN TTVVVGTIGY MAPELARNGK SSSASDVFAF GVLLLEIVSG RRPTDSGTFF LADWVMELHA
601: RGEILHAVDP RLGFGYDGVE ARLALVVGLL CCHQRPTSRP SMRTVLRYLN GDDDVPEIDN DWGYSDSSRS DLGSNFEGYV SSDRASSSVP SFSVTRVSSS
701: SVISGR

Arabidopsis Description

LECRKA4.2lectin receptor kinase a4.1 [Source:TAIR;Acc:AT5G01550]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.