Factsheet for Solyc09g005000.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068512	Potato	plasma membrane	92.73	92.87
VIT_13s0067g01640.t01	Wine grape	vacuole	48.81	48.89
VIT_13s0067g01590.t01	Wine grape	plasma membrane, vacuole	48.37	48.37
TraesCS4D01G288200.1	Wheat	plasma membrane	46.59	46.73
TraesCS4B01G289100.1	Wheat	plasma membrane	46.44	46.03
Zm00001d043781_P001	Maize	plasma membrane	45.85	45.98
TraesCS1A01G184400.1	Wheat	plasma membrane	45.99	45.72
EER94566	Sorghum	plasma membrane	45.7	45.49
Solyc10g084860.1.1	Tomato	plasma membrane	44.96	45.43
Solyc09g011990.1.1	Tomato	plasma membrane	44.66	45.06
Solyc05g053010.1.1	Tomato	plasma membrane	45.85	44.78
Os10t0533800-00	Rice	plasma membrane	46.14	44.56
Solyc09g011070.1.1	Tomato	plasma membrane	44.51	44.05
Solyc09g012000.1.1	Tomato	plasma membrane	43.62	43.95
KRH42204	Soybean	plasma membrane	39.61	40.09
Solyc09g011060.2.1	Tomato	plasma membrane	43.47	35.22

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	ProteinID:AKV93712.1	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0030246	InterPro:IPR000719	UniProt:K4CPZ0	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069
PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF43
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g005000.1	EnsemblPlants:Solyc09g005000.1.1	TMHMM:TMhelix	UniParc:UPI000276ACFE	SEG:seg

Description

Clade VI lectin receptor kinase [Source:UniProtKB/TrEMBL;Acc:K4CPZ0]

Coordinates

chr9:+:6033..8057

Molecular Weight (calculated)

74248.7 Da

IEP (calculated)

6.554

GRAVY (calculated)

-0.048

Length

674 amino acids

Sequence
(BLAST)

001: MDNPYCLVII LALIFCPILV RAQSFDFAYN GFNNSNIIRD GVAIINSSGA LKLTNRSYNV IGHAFHPNPV PIFNSSTKNV TSFSTYFVFA IVPLEKTSGG
101: FGFAFTLSPS PGFPGAQGDH FLGVVNIMND GNDTNHIFMV EFDTVNGHNE GVDTDGNHIG VNRNGMSPTA SKSADYYVND SAVAEQVNLQ SGESIQAWID
201: YDGMSKVVNV TISPITVPKP GRPLISEVVD LSTVLNETMY AGFSAATGDK ASSHYILGWS FRLNGAADPL ELVKLPVAPP EVVTSSKNSH LKRALIGTFC
301: SVVILLLGAF YIYTRMRQHE VLEDWELDCP HRFRYRHLYK ATKGFQESEL IGVGGFGAVY KGVLPTNGAE VAVKKISSNS LQGMREFAAE IESLGRLRHK
401: HLINLQGWCK NKNDLLLVYD YVPNGSLDSL LYRQKRDIVL TWEQRFNIIK GIAAGLLYLH EEWEQVVIHR DVKSSNVLID GEMNGRLGDF GLARLYDHGK
501: NSHTTNVVGT IGYIAPELTR TGKASTSTDV YAYGVLLLEV ASGRPPIVYE PGKGALVLAD WVIECLQLGN ILDAVDQRLN SVYVDKEVQM IFRLGLVCSH
601: PRPEARPTMR QVMKYLNGDE SLPVFEQQLS CIGSDRVDEI TAKFLEVFST DTINISRRSL SVGQISSSSL HSGR

Best Arabidopsis Sequence Match ( AT5G01550.1 )
(BLAST)

001: MFLMYRSLMG TARSIISFML VLFLLLTIPT RAQRTTTETP KTEFIFRGFS GNQSNIVTTG AATIKLDGLL RLTDRNSNVT GTSFYHKPVR LLETNTSSTN
101: STIRSFSTSF VFVIIPTSSS NGGFGFTFTL SPTPDRTGAE SAQYLGLLNK ANDGNSTNHV FAVEFDTVQG FKDGADRTGN HIGLNFNSLT SDVQEPVVYY
201: DNEDPNRKED FPLQSGDPIR AILDYDGPTQ TLNLTVYPAN LKSRPVRPLI SRPVPKLSQI VQEEMYVGFT AATGRDQSSA HYVMGWSFSS GGDLLTEDTL
301: DLLELPRPPP NTAKKRGYNS QVLALIVALS GVTVILLALL FFFVMYKKRL QQGEVLEDWE INHPHRLRYK DLYAATDGFK ENRIVGTGGF GTVFRGNLSS
401: PSSDQIAVKK ITPNSMQGVR EFIAEIESLG RLRHKNLVNL QGWCKQKNDL LLIYDYIPNG SLDSLLYSRP RQSGVVLSWN ARFKIAKGIA SGLLYLHEEW
501: EKVVIHRDIK PSNVLIEDDM NPRLGDFGLA RLYERGSQSN TTVVVGTIGY MAPELARNGK SSSASDVFAF GVLLLEIVSG RRPTDSGTFF LADWVMELHA
601: RGEILHAVDP RLGFGYDGVE ARLALVVGLL CCHQRPTSRP SMRTVLRYLN GDDDVPEIDN DWGYSDSSRS DLGSNFEGYV SSDRASSSVP SFSVTRVSSS
701: SVISGR

Arabidopsis Description

LECRKA4.2lectin receptor kinase a4.1 [Source:TAIR;Acc:AT5G01550]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.