Factsheet for Solyc05g053010.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069794	Potato	plasma membrane	93.91	93.91
VIT_13s0019g02040.t01	Wine grape	plasma membrane	68.41	69.51
KRH31001	Soybean	plasma membrane	60.87	62.04
CDY02947	Canola	plasma membrane	53.04	60.2
Bra003216.1-P	Field mustard	cytosol	56.23	60.16
Solyc09g011070.1.1	Tomato	plasma membrane	59.28	60.06
Solyc10g084860.1.1	Tomato	plasma membrane	57.83	59.82
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	45.22	58.87
AT3G55550.1	Thale cress	plasma membrane	58.26	58.77
CDX76086	Canola	plasma membrane	55.8	56.53
Bra014736.1-P	Field mustard	plasma membrane	55.8	56.53
TraesCS5B01G084800.1	Wheat	plasma membrane	55.51	55.27
Os12t0574700-00	Rice	plasma membrane	54.93	55.25
TraesCS5A01G081600.1	Wheat	plasma membrane	55.51	55.11
TraesCS5D01G091000.1	Wheat	plasma membrane	55.07	54.83
HORVU5Hr1G020530.1	Barley	plasma membrane	55.65	54.16
Zm00001d030759_P001	Maize	plasma membrane	53.91	53.91
EES17246	Sorghum	plasma membrane	53.91	53.68
Solyc09g012000.1.1	Tomato	plasma membrane	48.41	49.93
Solyc09g011990.1.1	Tomato	plasma membrane	48.26	49.85
Solyc09g005000.1.1	Tomato	plasma membrane	44.78	45.85
Solyc09g011060.2.1	Tomato	plasma membrane	48.26	40.02

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	ProteinID:AKV93722.1	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0002229	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0030246	GO:GO:0042742	InterPro:IPR000719	UniProt:K4C1Y1	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom
PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007
PANTHER:PTHR27007:SF27	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc05g053010.1	EnsemblPlants:Solyc05g053010.1.1	TMHMM:TMhelix	UniParc:UPI00027660EA
SEG:seg	:	:	:	:	:

Description

L-type lectin-domain containing receptor kinase S.4 [Source:Projected from Arabidopsis thaliana (AT3G55550) UniProtKB/Swiss-Prot;Acc:Q9M2S4]

Coordinates

chr5:+:63174344..63176416

Molecular Weight (calculated)

76637.6 Da

IEP (calculated)

5.846

GRAVY (calculated)

-0.063

Length

690 amino acids

Sequence
(BLAST)

001: MAKQITLTLF LILCILPSRT VFSDEFVYNG FNGVEASNLT VNGVAQILKN GALKLTNETS RVVGHVFYKN PIKFKNSQYG KVSSFSTAFA FGIVPEYAKL
101: GGHGFAFTIS RSEEMKGALP SQYLGLLSSS NVGNFSNHVF AVEFDTVQDF EFGDISDNHV GIDLNDLKSN ASVNASYFSE GSLSKQKLFL QSGKTIQAWI
201: DYDSSRNLLN VSLSLSSTKP AFSILSFPVD LSLVFEEFMY VGFSASTGLL ASSHYIFGWS FNMNGIAQSL NLDSLPFLPK TKKDQTILIV ATAVSAVVFF
301: AFGLILALYV IWKIKKIDVI EPWELEIGPH RFSYKELKKA TRGFRDKELL GFGGFGRVYK GTLPKTNIVV AVKRIHHEAK QGLQEFVSEI ATIGRLRHRN
401: LVQLLGWCRR RGDLLLVYDF MSNGSLDKYI YDEPRVTLTW DQRFKVIKGV ASGLLYLHEE WEQTVIHRDI KAGNVLLDSD MNGRLGDFGL AKLYEHGENP
501: STTRVVGTLG YLAPELTKTG KPTTSSDVFA FGALLLEVVC GRRPIEAKAL PEELILVDWV WDKWNDGVIL EVVDSRLNGE YDEMEAIMVL KLGLMCSNNT
601: PSKRPSTRLV VRYLEGEVTL PETLAAPGEY DGKKGGTSGM ELDDFIDSYP SSSYFEKVST WSSAYDGEGD IDIEANSVAP LTDSGREDNR

Best Arabidopsis Sequence Match ( AT3G55550.1 )
(BLAST)

001: MSQTFAVILL LLIFLTHLVS SLIQDFSFIG FKKASPNLTL NGVAEIAPTG AIRLTTETQR VIGHAFYSLP IRFKPIGVNR ALSFSTSFAI AMVPEFVTLG
101: GHGLAFAITP TPDLRGSLPS QYLGLLNSSR VNFSSHFFAV EFDTVRDLEF EDINDNHVGI DINSMESSIS TPAGYFLANS TKKELFLDGG RVIQAWIDYD
201: SNKKRLDVKL SPFSEKPKLS LLSYDVDLSS VLGDEMYVGF SASTGLLASS HYILGWNFNM SGEAFSLSLP SLPRIPSSIK KRKKKRQSLI LGVSLLCSLL
301: IFAVLVAASL FVVRKVKDED RVEEWELDFG PHRFSYRELK KATNGFGDKE LLGSGGFGKV YKGKLPGSDE FVAVKRISHE SRQGVREFMS EVSSIGHLRH
401: RNLVQLLGWC RRRDDLLLVY DFMPNGSLDM YLFDENPEVI LTWKQRFKII KGVASGLLYL HEGWEQTVIH RDIKAANVLL DSEMNGRVGD FGLAKLYEHG
501: SDPGATRVVG TFGYLAPELT KSGKLTTSTD VYAFGAVLLE VACGRRPIET SALPEELVMV DWVWSRWQSG DIRDVVDRRL NGEFDEEEVV MVIKLGLLCS
601: NNSPEVRPTM RQVVMYLEKQ FPSPEVVPAP DFLDANDSMC LDERSGSAGE FEDFVDSARF YSGPNETTTS SIFSFSGKTR TDPR

Arabidopsis Description

LECRKS4L-type lectin-domain containing receptor kinase S.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2S4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.